RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 PRDX1Q06830 199 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 RBBP5Q15291 538 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 RPE65Q16518 533 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TMTC4Q5T4D3 741 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ANKRD26P1Q6NSI1 321 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CLECL1Q8IZS7 167 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 C10orf111Q8N326 155 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ANKRD53Q8N9V6 530 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 OR1E3Q8WZA6 343 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SNX19Q92543 992 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SLC29A1Q99808 456 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CENPKQ9BS16 269 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TBCDQ9BTW9 1192 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CHID1Q9BWS9 393 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SPATA9Q9BWV2 254 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 OSBPL11Q9BXB4 747 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 YY1AP1Q9H869 796 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ATAD3AQ9NVI7 634 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 USP36Q9P275 1121 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ERVK-11Q9UQG0 969 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 WBP11Q9Y2W2 641 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 MDC1Q14676 2089 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 C7orf72A4D263 438 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SOCS2O14508 198 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TOR1BO14657 336 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TNFRSF10CO14798 259 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 KDM1AO60341 852 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CREG1O75629 220 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 LDLRP01130 860 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 IGLV3-19P01714 112 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 FURINP09958 794 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 UBTFL6P0CB48 400 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CKMT2P17540 419 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CHRNB3Q05901 458 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SLC14A1Q13336 389 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 DEPDC1Q5TB30 811 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 KHDRBS2Q5VWX1 349 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ERICH5Q6P6B1 374 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 UGT2A3Q6UWM9 527 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ABRAXAS1Q6UWZ7 409 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZNF551Q7Z340 670 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PGBD3Q8N328 593 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 MFSD2AQ8NA29 543 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 OR52E1Q8NGJ3 308 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 OR2A1Q8NGT9 310 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 GOT1L1Q8NHS2 421 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 FAM162AQ96A26 154 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PDXPQ96GD0 296 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 BMFQ96LC9 184 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 RNF145Q96MT1 663 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SEPHS2Q99611 448 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CDX2Q99626 313 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PHF7Q9BWX1 381 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 KIR3DX1Q9H7L2 352 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PRDM8Q9NQV8 689 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SLC2A4RGQ9NR83 387 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 DCAF13Q9NV06 445 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZNF639Q9UID6 485 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ICKQ9UPZ9 632 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CORO2BQ9UQ03 480 aa17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-201ENST00000374943 C1orf226A1L170 272 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 FAM149AA5PLN7 773 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SAP18O00422 153 aaKnown RBP17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 NARSO43776 548 aaKnown RBP17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PRICKLE3O43900 615 aaPredicted RBP17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PRSS23O95084 383 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ENGP17813 658 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 HTR1BP28222 390 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 YPEL5P62699 121 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CSNK1G2P78368 415 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 KRT33BQ14525 404 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 NRF1Q16656 503 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZNF385BQ569K4 471 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CPZQ66K79 652 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ENPP7Q6UWV6 458 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZNF621Q6ZSS3 439 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 FKBP9P1Q75LS8 142 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZNF717Q9BY31 904 aaPredicted RBP17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 MAGIXQ9H6Y5 334 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZNF282Q9UDV7 671 aaPredicted RBP17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PCOLCE2Q9UKZ9 415 aa17.24■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SAC3D1A6NKF1 404 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 OR52A4PA6NMU1 304 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 H7BY64 318 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PLPP1O14494 284 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ACOX3O15254 700 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 RASAL1O95294 804 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CPSF4O95639 269 aaKnown RBP17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 KLK1P06870 262 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ASGR2P07307 311 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 NDUFS1P28331 727 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TPP2P29144 1249 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 AKT2P31751 481 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 GSTM5P46439 218 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ABATP80404 500 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 APLFQ8IW19 511 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PRAP1Q96NZ9 151 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 BDH2Q9BUT1 245 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SCHIP1Q9P0W5 487 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms