RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 WARSP23381 471 aaKnown RBP19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 APEX1P27695 318 aaKnown RBP19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 CLDN20P56880 219 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 CDH18Q13634 790 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 ANGPT1Q15389 498 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 CLVS2Q5SYC1 327 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 WSCD1Q658N2 575 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 GPAT4Q86UL3 456 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 TTLQ8NG68 377 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 OR4L1Q8NH43 312 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 RIT1Q92963 219 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 TPD52L3Q96J77 140 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 HEXA-AS1Q9H8Q6 139 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 RLIMQ9NVW2 624 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 ATP6V1HQ9UI12 483 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 MGAT4AQ9UM21 535 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 DUSP12Q9UNI6 340 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 PCDHGA2Q9Y5H1 932 aa19.86■□□□□ 0.77
TMEFF1-201ENST00000374879 SMIM35A0A1B0GVV1 85 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 RPS10-NUDT3A0A1W2PQS6 291 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 FFAR3O14843 346 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 GPR42O15529 346 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 COL6A1P12109 1028 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 KDELR2P33947 212 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 PCBP1Q15365 356 aaKnown RBP eCLIP19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 IQCCQ4KMZ1 466 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 LRIF1Q5T3J3 769 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 METTL2BQ6P1Q9 378 aaKnown RBP19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 GOLGA7Q7Z5G4 137 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 GPALPP1Q8IXQ4 340 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 PGBD3Q8N328 593 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 ARRDC4Q8NCT1 418 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 C19orf18Q8NEA5 215 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 DENND6BQ8NEG7 585 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 GTF3C2Q8WUA4 911 aaPredicted RBP19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 GIMAP1Q8WWP7 306 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 KCNH6Q9H252 994 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 MCCC2Q9HCC0 563 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 RNF181Q9P0P0 153 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 DIMT1Q9UNQ2 313 aaKnown RBP19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 ALDH1A1P00352 501 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 RAF1P04049 648 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 IFNA16P05015 189 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 SCG5P05408 212 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 CKMT1AP12532 417 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 IGFBP6P24592 240 aaPredicted RBP19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 PTPN6P29350 595 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 GRK1Q15835 563 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 EIF3MQ7L2H7 374 aaKnown RBP19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 LINC00518Q8N0U6 118 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 SLC5A8Q8N695 610 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 TOP6BLQ8N6T0 577 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 EEF1AKMT1Q8WVE0 214 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 ULK4Q96C45 1275 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 ZC3HAV1LQ96H79 300 aaKnown RBP19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 RTP3Q9BQQ7 232 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 MCOLN1Q9GZU1 580 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 WASH6PQ9NQA3 447 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 TMEM30AQ9NV96 361 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 RPS6KA6Q9UK32 745 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 RIMKLBQ9ULI2 386 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 BRCA2P51587 3418 aa19.85■□□□□ 0.77
TMEFF1-201ENST00000374879 LOC102723532A0A0G2JNH3 316 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 SMIM30A4D0T7 59 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 CCT3P49368 545 aaKnown RBP19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 MAP2K6P52564 334 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 ABATP80404 500 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 HNRNPA0Q13151 305 aaKnown RBP19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 IKZF1Q13422 519 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 XKR4Q5GH76 650 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 UBXN11Q5T124 520 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 SLC34A3Q8N130 599 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 ZNF578Q96N58 590 aaPredicted RBP19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 FAM129BQ96TA1 746 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 EPYCQ99645 322 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 RACGAP1Q9H0H5 632 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 IMPAD1Q9NX62 359 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 MPP6Q9NZW5 540 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 UXTQ9UBK9 157 aaPredicted RBP19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 ZNF623O75123 536 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 TSPAN12O95859 305 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 CYP27C1Q4G0S4 372 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 HDDC2Q7Z4H3 204 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 SIDT2Q8NBJ9 832 aaKnown RBP19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 MSLNLQ96KJ4 702 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 KLHL15Q96M94 604 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 TINF2Q9BSI4 451 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 MARVELD1Q9BSK0 173 aa19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 PLEKHB1Q9UF11 243 aaPredicted RBP19.84■□□□□ 0.77
TMEFF1-201ENST00000374879 ATXN1LP0C7T5 689 aaKnown RBP19.83■□□□□ 0.77
TMEFF1-201ENST00000374879 SLC2A2P11168 524 aaPredicted RBP19.83■□□□□ 0.77
TMEFF1-201ENST00000374879 PSMA1P25786 263 aaKnown RBP19.83■□□□□ 0.77
TMEFF1-201ENST00000374879 PXNP49023 591 aaPredicted RBP19.83■□□□□ 0.77
TMEFF1-201ENST00000374879 FAM189BP81408 668 aa19.83■□□□□ 0.77
TMEFF1-201ENST00000374879 ACVR1Q04771 509 aa19.83■□□□□ 0.77
TMEFF1-201ENST00000374879 SLC10A7Q0GE19 358 aa19.83■□□□□ 0.77
TMEFF1-201ENST00000374879 SGO1Q5FBB7 561 aa19.83■□□□□ 0.77
TMEFF1-201ENST00000374879 OVOS1Q6IE37 1185 aa19.83■□□□□ 0.77
TMEFF1-201ENST00000374879 GPR142Q7Z601 462 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms