RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 NT5CQ8TCD5 201 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 PTCD3Q96EY7 689 aaKnown RBP11.41□□□□□ -0.58
HDAC8-201ENST00000373554 VPS50Q96JG6 964 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 GPR78Q96P69 363 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 EFCAB11Q9BUY7 163 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 PITHD1Q9GZP4 211 aaPredicted RBP11.41□□□□□ -0.58
HDAC8-201ENST00000373554 ING2Q9H160 280 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 PPCSQ9HAB8 311 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 SEMA3GQ9NS98 782 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 CPSF2Q9P2I0 782 aaKnown RBP11.41□□□□□ -0.58
HDAC8-201ENST00000373554 XPR1Q9UBH6 696 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 TMCO1Q9UM00 188 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 G3BP2Q9UN86 482 aaKnown RBP11.41□□□□□ -0.58
HDAC8-201ENST00000373554 ANGPTL3Q9Y5C1 460 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 TNPO3Q9Y5L0 923 aaKnown RBP11.41□□□□□ -0.58
HDAC8-201ENST00000373554 SLC22A7Q9Y694 548 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 MAP2K7O14733 419 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 FFAR3O14843 346 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 GPR42O15529 346 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 KLHL18O94889 574 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 EPB42P16452 691 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 ALOX12P18054 663 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 HPDP32754 393 aaPredicted RBP11.4□□□□□ -0.58
HDAC8-201ENST00000373554 PIK3CGP48736 1102 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 KLC1Q07866 573 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 CHAF1BQ13112 559 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 CHIT1Q13231 466 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 LAPTM5Q13571 262 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 RBBP7Q16576 425 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 HIST2H2ACQ16777 129 aaPredicted RBP11.4□□□□□ -0.58
HDAC8-201ENST00000373554 VWA2Q5GFL6 755 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 HIST2H2AA3Q6FI13 130 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 TIFABQ6ZNK6 161 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 PRSS41Q7RTY9 318 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 PPP1R32Q7Z5V6 425 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 LCA5Q86VQ0 697 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.4□□□□□ -0.58
HDAC8-201ENST00000373554 PRSS58Q8IYP2 241 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 ANKRD53Q8N9V6 530 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 C9orf43Q8TAL5 461 aaPredicted RBP11.4□□□□□ -0.58
HDAC8-201ENST00000373554 MOCOSQ96EN8 888 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 WDR34Q96EX3 536 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 SEC16BQ96JE7 1060 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 FER1L6-AS2Q96M78 137 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 SEMA4CQ9C0C4 833 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 SLC25A18Q9H1K4 315 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 MRPL46Q9H2W6 279 aaKnown RBP11.4□□□□□ -0.58
HDAC8-201ENST00000373554 NT5DC2Q9H857 520 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 ZNF358Q9NW07 568 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 P4HTMQ9NXG6 502 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 COPG2Q9UBF2 871 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.4□□□□□ -0.58
HDAC8-201ENST00000373554 TBK1Q9UHD2 729 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 C3orf18Q9UK00 162 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 NAALAD2Q9Y3Q0 740 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 ASB1Q9Y576 335 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 V9GYY5 206 aaPredicted RBP11.4□□□□□ -0.58
HDAC8-201ENST00000373554 ATMQ13315 3056 aa11.4□□□□□ -0.58
HDAC8-201ENST00000373554 SEC16AO15027 2179 aa11.4□□□□□ -0.59
HDAC8-201ENST00000373554 ANKDD1BA6NHY2 528 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 SGK494L7N484 410 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 AGPSO00116 658 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 KLK8O60259 260 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 SMIM24O75264 130 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 RDH16O75452 317 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 DNAJB5O75953 348 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 PRB1P04280 392 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 SERPINA6P08185 405 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 EPORP19235 508 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 HNF4AP41235 474 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 STXBP1P61764 594 aaKnown RBP11.39□□□□□ -0.59
HDAC8-201ENST00000373554 SNRPNP63162 240 aaKnown RBP11.39□□□□□ -0.59
HDAC8-201ENST00000373554 MAT1AQ00266 395 aaKnown RBP11.39□□□□□ -0.59
HDAC8-201ENST00000373554 DOC2AQ14183 400 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 TBCCQ15814 346 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 SYT16Q17RD7 645 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 DEFB134Q4QY38 66 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 METTL2BQ6P1Q9 378 aaKnown RBP11.39□□□□□ -0.59
HDAC8-201ENST00000373554 WDR93Q6P2C0 686 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 EMBQ6PCB8 327 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 MYLK4Q86YV6 388 aaPredicted RBP11.39□□□□□ -0.59
HDAC8-201ENST00000373554 AFAP1L2Q8N4X5 818 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 TEX9Q8N6V9 391 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 PTGR2Q8N8N7 351 aaPredicted RBP11.39□□□□□ -0.59
HDAC8-201ENST00000373554 CLEC1AQ8NC01 280 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 ACMSDQ8TDX5 336 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 CCT6BQ92526 530 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 UBE2E3Q969T4 207 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 ABHD17AQ96GS6 310 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 MRPL57Q9BQC6 102 aaKnown RBP11.39□□□□□ -0.59
HDAC8-201ENST00000373554 TRIM55Q9BYV6 548 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 TGIF2Q9GZN2 237 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 SLC6A16Q9GZN6 736 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 PRM3Q9NNZ6 103 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 HCN3Q9P1Z3 774 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 HS3ST3B1Q9Y662 390 aa11.39□□□□□ -0.59
HDAC8-201ENST00000373554 PIEZO2Q9H5I5 2752 aa11.38□□□□□ -0.59
HDAC8-201ENST00000373554 A0A088AWK7 358 aa11.38□□□□□ -0.59
HDAC8-201ENST00000373554 ZNF860A6NHJ4 632 aa11.38□□□□□ -0.59
HDAC8-201ENST00000373554 SMIM23A6NLE4 172 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms