RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ZZZ3Q8IYH5 903 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 SORBS1Q9BX66 1292 aaKnown RBP18.78■□□□□ 0.6
HDAC1-201ENST00000373548 BHLHE41Q9C0J9 482 aaPredicted RBP18.78■□□□□ 0.6
HDAC1-201ENST00000373548 XKR8Q9H6D3 395 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 YY1AP1Q9H869 796 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 TPT1P8Q9HAU6 139 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 AASDHPPTQ9NRN7 309 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 OLAHQ9NV23 265 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 CD207Q9UJ71 328 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 OR52A4PA6NMU1 304 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 H3BQ06 376 aaPredicted RBP18.77■□□□□ 0.6
HDAC1-201ENST00000373548 H7BY64 318 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 PLOD2O00469 737 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 RNASET2O00584 256 aaKnown RBP18.77■□□□□ 0.6
HDAC1-201ENST00000373548 FURINP09958 794 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 SMIM18P0DKX4 95 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 ZNF23P17027 643 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 CXCR2P25025 360 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 CLDN2P57739 230 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 TAS2R50P59544 299 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 GAB1Q13480 694 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 RNF220Q5VTB9 566 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 KIAA1324Q6UXG2 1013 aaKnown RBP18.77■□□□□ 0.6
HDAC1-201ENST00000373548 SLC44A3Q8N4M1 653 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 OR4K1Q8NGD4 311 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 RPLP0P6Q8NHW5 317 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 PNPT1Q8TCS8 783 aaKnown RBP18.77■□□□□ 0.6
HDAC1-201ENST00000373548 PRAP1Q96NZ9 151 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 ANKRD60Q9BZ19 345 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 PLXND1Q9Y4D7 1925 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 ANKDD1BA6NHY2 528 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 PDZK1P1A8MUH7 402 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 ACADMP11310 421 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 NDUFV2P19404 249 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 RAB28P51157 221 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 CYP4F2P78329 520 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 CTBSQ01459 385 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 C2orf80Q0P641 193 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 UAP1L1Q3KQV9 507 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 CPZQ66K79 652 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 TMEM214Q6NUQ4 689 aaKnown RBP18.77■□□□□ 0.6
HDAC1-201ENST00000373548 TBPL2Q6SJ96 375 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 PTOV1Q86YD1 416 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 RAB42Q8N4Z0 105 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 MS4A8Q9BY19 250 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 KCNK12Q9HB15 430 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 PRDM8Q9NQV8 689 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 CA5BQ9Y2D0 317 aa18.77■□□□□ 0.6
HDAC1-201ENST00000373548 FEZF1A0PJY2 475 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 PRSS38A1L453 326 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 TNFAIP8O95379 198 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 IL1RNP18510 177 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 TPP2P29144 1249 aaPredicted RBP18.76■□□□□ 0.59
HDAC1-201ENST00000373548 PKLRP30613 574 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 ACSL1P33121 698 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 VMACQ2NL98 169 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 IYDQ6PHW0 289 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 LPCAT2Q7L5N7 544 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 CLEC4FQ8N1N0 589 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 TMBIM1Q969X1 311 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 MAGIXQ9H6Y5 334 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 ZNF696Q9H7X3 374 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 GMEB1Q9Y692 573 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 MYO10Q9HD67 2058 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 SPTBN5Q9NRC6 3674 aaKnown RBP18.76■□□□□ 0.59
HDAC1-201ENST00000373548 PRAMEF33A0A0G2JMD5 474 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 PLPP1O14494 284 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 RPS9P46781 194 aaKnown RBP18.76■□□□□ 0.59
HDAC1-201ENST00000373548 CLCN2P51788 898 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 KIAA1024LP59773 190 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 LRRC74AQ0VAA2 488 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 ADRM1Q16186 407 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 MPEG1Q2M385 716 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 DEPDC1Q5TB30 811 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 KHDRBS2Q5VWX1 349 aaKnown RBP18.76■□□□□ 0.59
HDAC1-201ENST00000373548 FOXB2Q5VYV0 432 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 R3HCC1LQ7Z5L2 792 aaKnown RBP18.76■□□□□ 0.59
HDAC1-201ENST00000373548 OR4A15Q8NGL6 344 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 ZFP90Q8TF47 636 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 DNASE1L2Q92874 299 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 PPCDCQ96CD2 204 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 OR2M4Q96R27 311 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 DPH2Q9BQC3 489 aaPredicted RBP18.76■□□□□ 0.59
HDAC1-201ENST00000373548 ADI1Q9BV57 179 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 ZNF717Q9BY31 904 aaPredicted RBP18.76■□□□□ 0.59
HDAC1-201ENST00000373548 NT5DC2Q9H857 520 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 ATAD3AQ9NVI7 634 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 VPS4AQ9UN37 437 aa18.76■□□□□ 0.59
HDAC1-201ENST00000373548 MYOCOSA0A1B0GUC4 107 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 MAP3K13O43283 966 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 SEMA3DO95025 777 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 CCNDBP1O95273 360 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 HOXC4P09017 264 aaPredicted RBP18.75■□□□□ 0.59
HDAC1-201ENST00000373548 RPL3P39023 403 aaKnown RBP18.75■□□□□ 0.59
HDAC1-201ENST00000373548 CSNK1G2P78368 415 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 MERTKQ12866 999 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 KRT33BQ14525 404 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 PRSS53Q2L4Q9 553 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 ERICH5Q6P6B1 374 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 OR52E1Q8NGJ3 308 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms