RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 CLCA1A8K7I4 914 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 TNFRSF21O75509 655 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 CDK1P06493 297 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 HLA-EP13747 358 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 NAE1Q13564 534 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 DSG4Q86SJ6 1040 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 P3H2Q8IVL5 708 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 C11orf65Q8NCR3 313 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 VPS37AQ8NEZ2 397 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 OR7G3Q8NG95 312 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 OR56A3Q8NH54 315 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 HUS1BQ8NHY5 278 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 MCFD2Q8NI22 146 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.27□□□□□ -0.45
CTPS1-202ENST00000372621 FOXJ1Q92949 421 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 RAD9AQ99638 391 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 EMILIN2Q9BXX0 1053 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 NXF2Q9GZY0 626 aaKnown RBP12.27□□□□□ -0.45
CTPS1-202ENST00000372621 FAM83DQ9H4H8 585 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 RLIMQ9NVW2 624 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 ZNF282Q9UDV7 671 aaPredicted RBP12.27□□□□□ -0.45
CTPS1-202ENST00000372621 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.27□□□□□ -0.45
CTPS1-202ENST00000372621 MAPRE3Q9UPY8 281 aa12.27□□□□□ -0.45
CTPS1-202ENST00000372621 A0A1W2PQ67 120 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 OR2AG2A6NM03 316 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 TNFRSF11BO00300 401 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 ADAMDEC1O15204 470 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 AIREO43918 545 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 ZNF30P17039 623 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 IMPA1P29218 277 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 MAGEA10P43363 369 aaPredicted RBP12.26□□□□□ -0.45
CTPS1-202ENST00000372621 TEKQ02763 1124 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 CDC20Q12834 499 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 ZNF404Q494X3 552 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 ZNF385BQ569K4 471 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 SPIN4Q56A73 249 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 COX20Q5RI15 118 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 ZNF648Q5T619 568 aaPredicted RBP12.26□□□□□ -0.45
CTPS1-202ENST00000372621 SLC22A16Q86VW1 577 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 HS6ST3Q8IZP7 471 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 SLC5A8Q8N695 610 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 RAET1EQ8TD07 263 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 ATL1Q8WXF7 558 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 MRPS31Q92665 395 aaKnown RBP12.26□□□□□ -0.45
CTPS1-202ENST00000372621 RUBCNLQ9H714 662 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 HMX1Q9NP08 348 aaPredicted RBP12.26□□□□□ -0.45
CTPS1-202ENST00000372621 TESMINQ9Y4I5 508 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 FADS2P1A8MWK0 482 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 WASH3PC4AMC7 463 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 LEFTY2O00292 366 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 CNOT3O75175 753 aaKnown RBP12.26□□□□□ -0.45
CTPS1-202ENST00000372621 GADD45AP24522 165 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 EIF2B2P49770 351 aaKnown RBP12.26□□□□□ -0.45
CTPS1-202ENST00000372621 CCL23P55773 120 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 POLR2LP62875 67 aaKnown RBP12.26□□□□□ -0.45
CTPS1-202ENST00000372621 HENMT1Q5T8I9 393 aaKnown RBP12.26□□□□□ -0.45
CTPS1-202ENST00000372621 GDPD4Q6W3E5 623 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 ZNF852Q6ZMS4 543 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 Q6ZVU0 165 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 SLC46A3Q7Z3Q1 461 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 MYDGFQ969H8 173 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 MED8Q96G25 268 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 TMEM169Q96HH4 297 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 ZNF226Q9NYT6 803 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 SPASTQ9UBP0 616 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 ATP6V1HQ9UI12 483 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 WDR37Q9Y2I8 494 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 A3GALT2U3KPV4 340 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 A8MVJ9 347 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 GRM6O15303 877 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 UPK1BO75841 260 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 TIA1P31483 386 aaKnown RBP eCLIP12.26□□□□□ -0.451e-7■■■□□ 14.6
CTPS1-202ENST00000372621 GRK5P34947 590 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 LRRC74AQ0VAA2 488 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 TIGD6Q17RP2 521 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 LYSMD2Q8IV50 215 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 OR10G2Q8NGC3 310 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 OR4A15Q8NGL6 344 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 OR2A12Q8NGT7 310 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 CD99L2Q8TCZ2 262 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 CXorf40BQ96DE9 158 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 SAMD11Q96NU1 681 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 BHLHE41Q9C0J9 482 aaPredicted RBP12.26□□□□□ -0.45
CTPS1-202ENST00000372621 POLE4Q9NR33 117 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 MAFFQ9ULX9 164 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 PCDHGA4Q9Y5G9 962 aa12.26□□□□□ -0.45
CTPS1-202ENST00000372621 ZBBXA8MT70 800 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 TAF4O00268 1085 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 DSCR3O14972 297 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 TEX28O15482 410 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 TSPAN6O43657 245 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 SH3BGRLO75368 114 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 SLC16A8O95907 504 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 URODP06132 367 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 ZNF8P17098 575 aaPredicted RBP12.25□□□□□ -0.45
CTPS1-202ENST00000372621 TNFRSF1BP20333 461 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 HOXD10P28358 340 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 VIPR1P32241 457 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 CTSKP43235 329 aa12.25□□□□□ -0.45
CTPS1-202ENST00000372621 HBA1P69905 142 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms