RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 OR4K3Q96R72 315 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 LPAR4Q99677 370 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 CPNE1Q99829 537 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 PITHD1Q9GZP4 211 aaPredicted RBP17.84■□□□□ 0.45
TMEM53-201ENST00000372235 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.84■□□□□ 0.45
TMEM53-201ENST00000372235 RAB17Q9H0T7 212 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 CNOT10Q9H9A5 744 aaKnown RBP17.84■□□□□ 0.45
TMEM53-201ENST00000372235 STMN3Q9NZ72 180 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 HCN3Q9P1Z3 774 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 SLC17A6Q9P2U8 582 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 NBASA2RRP1 2371 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 SETXQ7Z333 2677 aaKnown RBP17.84■□□□□ 0.45
TMEM53-201ENST00000372235 MAGEB17A8MXT2 336 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 GALR3O60755 368 aaPredicted RBP17.83■□□□□ 0.44
TMEM53-201ENST00000372235 CRYABP02511 175 aaKnown RBP17.83■□□□□ 0.44
TMEM53-201ENST00000372235 CASQ1P31415 396 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 SCTRP47872 440 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 ACTN3Q08043 901 aaPredicted RBP17.83■□□□□ 0.44
TMEM53-201ENST00000372235 NSDHLQ15738 373 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 BTBD16Q32M84 506 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 SIRT6Q8N6T7 355 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 GRHL3Q8TE85 626 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 TBC1D20Q96BZ9 403 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 DERL2Q9GZP9 239 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 OLAHQ9NV23 265 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 SH2B3Q9UQQ2 575 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 SLC22A14Q9Y267 594 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 CSAG2Q9Y5P2 127 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 PSAT1Q9Y617 370 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 ESPL1Q14674 2120 aa17.83■□□□□ 0.44
TMEM53-201ENST00000372235 A0A088AWK7 358 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 SYNDIG1LA6NDD5 238 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 TP73O15350 636 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 SEMA7AO75326 666 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 RDH16O75452 317 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 SERPIND1P05546 499 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 ZNF10P21506 573 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-201ENST00000372235 TAS2R39P59534 338 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 TAS2R50P59544 299 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 ATP6V0D1P61421 351 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 STXBP1P61764 594 aaKnown RBP17.82■□□□□ 0.44
TMEM53-201ENST00000372235 REEP5Q00765 189 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 NXPE4Q6UWF7 544 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 PRSS41Q7RTY9 318 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 ANKRD37Q7Z713 158 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 KRT78Q8N1N4 520 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 ZNF740Q8NDX6 193 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 DNAJB8Q8NHS0 232 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 MACROD1Q9BQ69 325 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 GPRC5BQ9NZH0 403 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 PLEKHB1Q9UF11 243 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-201ENST00000372235 PYCARDQ9ULZ3 195 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 RELNP78509 3460 aa17.82■□□□□ 0.44
TMEM53-201ENST00000372235 SPENQ96T58 3664 aaKnown RBP17.82■□□□□ 0.44
TMEM53-201ENST00000372235 DOCK10Q96BY6 2186 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 DOPEY2Q9Y3R5 2298 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 OR5H15A6NDH6 313 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 PSMD12O00232 456 aaPredicted RBP17.81■□□□□ 0.44
TMEM53-201ENST00000372235 CDC7O00311 574 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 STATHP02808 62 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 FHP07954 510 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 SERPINA6P08185 405 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 ITGAMP11215 1152 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 STMN1P16949 149 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 GP5P40197 560 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 ZNF33BQ06732 778 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 FASTKD3Q14CZ7 662 aaKnown RBP17.81■□□□□ 0.44
TMEM53-201ENST00000372235 ABRAXAS2Q15018 415 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 MEP1AQ16819 746 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 ZXDCQ2QGD7 858 aaPredicted RBP17.81■□□□□ 0.44
TMEM53-201ENST00000372235 CATSPEREQ5SY80 951 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 TMEM207Q6UWW9 146 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 TMPRSS11BQ86T26 416 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 PDSS2Q86YH6 399 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 KLHDC8AQ8IYD2 350 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 SLC5A8Q8N695 610 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 HORMAD2Q8N7B1 307 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 CATSPER1Q8NEC5 780 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 ARMC2Q8NEN0 867 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 PEX11GQ96HA9 241 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 MAGEB10Q96LZ2 347 aaPredicted RBP17.81■□□□□ 0.44
TMEM53-201ENST00000372235 MCMBPQ9BTE3 642 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 MMP25Q9NPA2 562 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 SAYSD1Q9NPB0 183 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 PCDHGB6Q9Y5F9 930 aa17.81■□□□□ 0.44
TMEM53-201ENST00000372235 NPEPPSL1A6NEC2 478 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 WIPF3A6NGB9 483 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 JRKO75564 520 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 SEC24DO94855 1032 aaPredicted RBP17.8■□□□□ 0.44
TMEM53-201ENST00000372235 RASAL1O95294 804 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 MLYCDO95822 493 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 WDPCPO95876 746 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 SPRP35270 261 aaPredicted RBP17.8■□□□□ 0.44
TMEM53-201ENST00000372235 USP10Q14694 798 aaKnown RBP17.8■□□□□ 0.44
TMEM53-201ENST00000372235 RBBP5Q15291 538 aaKnown RBP17.8■□□□□ 0.44
TMEM53-201ENST00000372235 DEFB134Q4QY38 66 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 C4orf17Q53FE4 359 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 H3F3CQ6NXT2 135 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 C3orf62Q6ZUJ4 267 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 SPNS2Q8IVW8 549 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms