RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 A0A0D9SEW6 157 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 OGDHQ02218 1023 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 MAP4K2Q12851 820 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 TIGD6Q17RP2 521 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 TRMT10BQ6PF06 316 aaKnown RBP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 ERN2Q76MJ5 926 aaKnown RBP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 ASB15Q8WXK1 588 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF354BQ96LW1 612 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 XYLT2Q9H1B5 865 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 C11orf16Q9NQ32 467 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 NECTIN3Q9NQS3 549 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 FAM53CQ9NYF3 392 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 NCDNQ9UBB6 729 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 TMEM59LQ9UK28 342 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 NHSL1Q5SYE7 1610 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 RIIAD1A6NNX1 92 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 TMEM63AO94886 807 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 CSTF2P33240 577 aaKnown RBP eCLIP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 MECP2P51608 486 aaKnown RBP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 LMAN2Q12907 356 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 RAB33AQ14088 237 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 DCAF12L1Q5VU92 463 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 CADM2Q8N3J6 435 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF433Q8N7K0 673 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 PIGXQ8TBF5 258 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 HHIPL1Q96JK4 782 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 PLEKHA6Q9Y2H5 1048 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 NUDT19A8MXV4 375 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 CYP11A1P05108 521 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 LAMP2P13473 410 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 RPL6Q02878 288 aaKnown RBP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 KLHL22Q53GT1 634 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF805Q5CZA5 627 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 RTL4Q6ZR62 310 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 LRRC70Q7Z2Q7 622 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 C9orf43Q8TAL5 461 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 OR2M4Q96R27 311 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 UPB1Q9UBR1 384 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 A8MU76 341 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 H3BSA7 217 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 FMO3P31513 532 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 NOVP48745 357 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 RPS21P63220 83 aaKnown RBP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 ADNP2Q6IQ32 1131 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 C14orf80Q86SX3 495 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 TMEM145Q8NBT3 493 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 SETD6Q8TBK2 473 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 TNFAIP8L1Q8WVP5 186 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 SGIP1Q9BQI5 828 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 C1orf109Q9NX04 203 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 CALML5Q9NZT1 146 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 GRIP1Q9Y3R0 1128 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 AOC1P19801 751 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 CLLU1OSQ5K130 101 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 C6orf89Q6UWU4 347 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 LHFPL3Q86UP9 236 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 NDC1Q9BTX1 674 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 SNTG1Q9NSN8 517 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 MAGEB3O15480 346 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 ITM2AO43736 263 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 OAZ2O95190 189 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 LDOC1O95751 146 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 CASRP41180 1078 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 MTPNP58546 118 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 COLEC12Q5KU26 742 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 MBOAT1Q6ZNC8 495 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 SLITRK4Q8IW52 837 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 SNIP1Q8TAD8 396 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 PHOSPHO2Q8TCD6 241 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 FAM83CQ9BQN1 747 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 CCDC86Q9H6F5 360 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 CD207Q9UJ71 328 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 CFL2Q9Y281 166 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 CFAP20Q9Y6A4 193 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 MYH13Q9UKX3 1938 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 LEFTY1O75610 366 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 GSRP00390 522 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 GSTT2BP0CG30 244 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 TMEM44Q2T9K0 475 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 CRTC2Q53ET0 693 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 NIPAL1Q6NVV3 410 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 PAQR3Q6TCH7 311 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 SPERTQ8NA61 448 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF784Q8NCA9 323 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 CAMKVQ8NCB2 501 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 RAB7BQ96AH8 199 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 TMED9Q9BVK6 235 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 CDADC1Q9BWV3 514 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 KCNK6Q9Y257 313 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 GADD45GO95257 159 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 SAGP10523 405 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 XRCC1P18887 633 aaPredicted RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 G0S2P27469 103 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 RHOUQ7L0Q8 258 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZC3H3Q8IXZ2 948 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 OR10H5Q8NGA6 315 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 ESAMQ96AP7 390 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 SLC2A13Q96QE2 648 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms