RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 UCK1Q9HA47 277 aa25.15■■□□□ 1.62
ATPAF1-202ENST00000371937 PACSIN3Q9UKS6 424 aa25.15■■□□□ 1.62
ATPAF1-202ENST00000371937 PCDHGA4Q9Y5G9 962 aa25.15■■□□□ 1.62
ATPAF1-202ENST00000371937 VCANP13611 3396 aa25.15■■□□□ 1.62
ATPAF1-202ENST00000371937 A0A1B0GVT2 93 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 PLPP1O14494 284 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 NDUFS4O43181 175 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 PIAS2O75928 621 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 SORBS2O94875 1100 aaKnown RBP25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 LMNAP02545 664 aaKnown RBP25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 SERPIND1P05546 499 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 COX7A2P14406 83 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 SNCBQ16143 134 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 HKDC1Q2TB90 917 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 SPESP1Q6UW49 350 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 DLEU7Q6UYE1 221 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 MAML2Q8IZL2 1156 aaPredicted RBP25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 RNF148Q8N7C7 305 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 ZUFSPQ96AP4 578 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 LDHAL6BQ9BYZ2 381 aaPredicted RBP25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 SLAMF8Q9P0V8 285 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 SUSD2Q9UGT4 822 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 BCAP29Q9UHQ4 241 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 KLHL20Q9Y2M5 609 aa25.14■■□□□ 1.62
ATPAF1-202ENST00000371937 SCAMP2O15127 329 aaKnown RBP25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 MAZP56270 477 aaKnown RBP25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 BIRC2Q13490 618 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 ZIC1Q15915 447 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 UGT8Q16880 541 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 C6orf10Q5SRN2 563 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 ARMC6Q6NXE6 501 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 KLHL35Q6PF15 583 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 SLC15A3Q8IY34 581 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 OR8J2Q8NGG1 315 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 DNAJB14Q8TBM8 379 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 ITCHQ96J02 903 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 REXO4Q9GZR2 422 aaKnown RBP25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 MYNNQ9NPC7 610 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 CD300AQ9UGN4 299 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 WBP11Q9Y2W2 641 aaKnown RBP25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 L3MBTL1Q9Y468 752 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 KLK4Q9Y5K2 254 aa25.14■■□□□ 1.61
ATPAF1-202ENST00000371937 OR2A25A4D2G3 310 aa25.13■■□□□ 1.61
ATPAF1-202ENST00000371937 LRIT2A6NDA9 550 aa25.13■■□□□ 1.61
ATPAF1-202ENST00000371937 OR5K3A6NET4 321 aa25.13■■□□□ 1.61
ATPAF1-202ENST00000371937 RPL3P39023 403 aaKnown RBP25.13■■□□□ 1.61
ATPAF1-202ENST00000371937 TJAP1Q5JTD0 557 aa25.13■■□□□ 1.61
ATPAF1-202ENST00000371937 OGFOD3Q6PK18 319 aa25.13■■□□□ 1.61
ATPAF1-202ENST00000371937 TMEM132CQ8N3T6 1108 aa25.13■■□□□ 1.61
ATPAF1-202ENST00000371937 C16orf78Q8WTQ4 265 aa25.13■■□□□ 1.61
ATPAF1-202ENST00000371937 SUCOQ9UBS9 1254 aaKnown RBP25.13■■□□□ 1.61
ATPAF1-202ENST00000371937 ADAM29Q9UKF5 820 aa25.13■■□□□ 1.61
ATPAF1-202ENST00000371937 ARHGAP10A1A4S6 786 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 NOBOXO60393 691 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 GBAP04062 536 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 MAGP20916 626 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 CTSKP43235 329 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 PHC1P78364 1004 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 SRSF5Q13243 272 aaKnown RBP25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 SIM2Q14190 667 aaPredicted RBP25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 DEFB133Q30KQ1 61 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 CCNYL2Q5T2Q4 361 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 FIGLAQ6QHK4 219 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 IKBIPQ70UQ0 350 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 R3HCC1LQ7Z5L2 792 aaKnown RBP25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 TRIM73Q86UV7 250 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 C17orf82Q86X59 251 aaPredicted RBP25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 KIAA2013Q8IYS2 634 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 OR7A2PQ8NGA2 310 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 JADE3Q92613 823 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 CGREF1Q99674 301 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 DCLRE1BQ9H816 532 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 MAN2B2Q9Y2E5 1009 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 PCDHA9Q9Y5H5 950 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 PRORSD1PA6NEY8 169 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 CAPN5O15484 640 aaPredicted RBP25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 SDC3O75056 442 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 ERN1O75460 977 aaKnown RBP25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 BSGP35613 385 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 ARFIP1P53367 373 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 RELAQ04206 551 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 CPTPQ5TA50 214 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 NANOGP8Q6NSW7 305 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 CAMKMTQ7Z624 323 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 NUDT13Q86X67 352 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 ZNF761Q86XN6 746 aaPredicted RBP25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 ASB9Q96DX5 294 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 ZNF717Q9BY31 904 aaPredicted RBP25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 KCNH6Q9H252 994 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 NANOGQ9H9S0 305 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 FAM120CQ9NX05 1096 aaKnown RBP25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 FBXO4Q9UKT5 387 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 CSNK1G3Q9Y6M4 447 aa25.12■■□□□ 1.61
ATPAF1-202ENST00000371937 SNRNP200O75643 2136 aaKnown RBP25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 A0A0J9YY10 115 aa25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 NME4O00746 187 aa25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 PPM1DO15297 605 aa25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 TPP2P29144 1249 aaPredicted RBP25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 HNRNPH1P31943 449 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms