RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 CTSBP07858 339 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 SBK3P0C264 359 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 PCNAP12004 261 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 EPORP19235 508 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 FBLP22087 321 aaKnown RBP13.1□□□□□ -0.31
SSR4-202ENST00000370085 PTPN4P29074 926 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 GCGRP47871 477 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 DNAJB13P59910 316 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 CYP4F2P78329 520 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 OCA2Q04671 838 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 CLCQ05315 142 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 E2F2Q14209 437 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 MLIPQ5VWP3 458 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 LIPMQ5VYY2 423 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 TTC19Q6DKK2 380 aaPredicted RBP13.1□□□□□ -0.31
SSR4-202ENST00000370085 TMEM214Q6NUQ4 689 aaKnown RBP13.1□□□□□ -0.31
SSR4-202ENST00000370085 MILR1Q7Z6M3 343 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 VASH2Q86V25 355 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.1□□□□□ -0.31
SSR4-202ENST00000370085 CCNYL1Q8N7R7 359 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 ANKRD53Q8N9V6 530 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 L3MBTL4Q8NA19 623 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 SRFBP1Q8NEF9 429 aaKnown RBP13.1□□□□□ -0.31
SSR4-202ENST00000370085 ARMC2Q8NEN0 867 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 ZNF483Q8TF39 744 aaPredicted RBP13.1□□□□□ -0.31
SSR4-202ENST00000370085 CT55Q8WUE5 264 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 RNF31Q96EP0 1072 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 MMABQ96EY8 250 aaPredicted RBP13.1□□□□□ -0.31
SSR4-202ENST00000370085 SLC45A3Q96JT2 553 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 FAR2Q96K12 515 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 FAM111AQ96PZ2 611 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 RHBGQ9H310 441 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 SEMA4BQ9NPR2 832 aaPredicted RBP13.1□□□□□ -0.31
SSR4-202ENST00000370085 EMCNQ9ULC0 261 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 FARSAQ9Y285 508 aaKnown RBP13.1□□□□□ -0.31
SSR4-202ENST00000370085 PCDHGA6Q9Y5G7 932 aa13.1□□□□□ -0.31
SSR4-202ENST00000370085 LRRC14BA6NHZ5 514 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 G3V2L1 256 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 H0YIV9 168 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 TM9SF1O15321 606 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 ZWINTO95229 277 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 NSA2O95478 260 aaKnown RBP13.09□□□□□ -0.31
SSR4-202ENST00000370085 LIFP15018 202 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 H2AFXP16104 143 aaPredicted RBP13.09□□□□□ -0.31
SSR4-202ENST00000370085 ALOX12P18054 663 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 PIK3CBP42338 1070 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 PKNOX1P55347 436 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 LCP2Q13094 533 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 IFT88Q13099 833 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 DSG2Q14126 1118 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 NCF4Q15080 339 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 CPSF6Q16630 551 aaKnown RBP eCLIP13.09□□□□□ -0.31
SSR4-202ENST00000370085 GGTA1PQ4G0N0 100 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 ZNF385CQ66K41 422 aaPredicted RBP13.09□□□□□ -0.31
SSR4-202ENST00000370085 TRIM40Q6P9F5 258 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 FAM199XQ6PEV8 388 aaPredicted RBP13.09□□□□□ -0.31
SSR4-202ENST00000370085 CHSY3Q70JA7 882 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 OVCH1Q7RTY7 1134 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 SYVN1Q86TM6 617 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 LAS2Q8IYD9 372 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 OR7G3Q8NG95 312 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 ZCCHC10Q8TBK6 192 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 TCP10LQ8TDR4 215 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 TRPC4APQ8TEL6 797 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 STARD8Q92502 1023 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 GAL3ST3Q96A11 431 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 VPS50Q96JG6 964 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 C10orf90Q96M02 699 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 TMEM237Q96Q45 408 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 YIPF2Q9BWQ6 316 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 ROGDIQ9GZN7 287 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 SPNS1Q9H2V7 528 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 WDR54Q9H977 334 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 CLK4Q9HAZ1 481 aaKnown RBP13.09□□□□□ -0.31
SSR4-202ENST00000370085 KCNK9Q9NPC2 374 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 OXSMQ9NWU1 459 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 ZNF282Q9UDV7 671 aaPredicted RBP13.09□□□□□ -0.31
SSR4-202ENST00000370085 SNX6Q9UNH7 406 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 TSC22D4Q9Y3Q8 395 aa13.09□□□□□ -0.31
SSR4-202ENST00000370085 USP24Q9UPU5 2620 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 OR7A17O14581 309 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 TRIM13O60858 407 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 CRCPO75575 148 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 ONECUT2O95948 504 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 RECKO95980 971 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 STATHP02808 62 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 FOLR3P41439 243 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 NAGLUP54802 743 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 CDH13P55290 713 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 VAC14Q08AM6 782 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 CRTC2Q53ET0 693 aaPredicted RBP13.08□□□□□ -0.32
SSR4-202ENST00000370085 TMEM35AQ53FP2 167 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 GPRIN3Q6ZVF9 776 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 EXOC3L1Q86VI1 746 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 METTL27Q8N6F8 245 aaPredicted RBP13.08□□□□□ -0.32
SSR4-202ENST00000370085 ENDOVQ8N8Q3 282 aaKnown RBP13.08□□□□□ -0.32
SSR4-202ENST00000370085 KCT2Q8NC54 265 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 PPP1R14CQ8TAE6 165 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms