RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SLC19A2O60779 497 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 EPOP01588 193 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 GNAO1P09471 354 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 IDSP22304 550 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 EXOC3L2Q2M3D2 409 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 ADGRD2Q7Z7M1 963 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 TP53INP2Q8IXH6 220 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 ALDH16A1Q8IZ83 802 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 SLC7A5P1Q8MH63 180 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 DOHHQ9BU89 302 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 SLC35F4A4IF30 521 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 PLD2O14939 933 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 ATE1O95260 518 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 TFAP2AP05549 437 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 ATP1B2P14415 290 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-202ENST00000369733 FDXRP22570 491 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 HTR1BP28222 390 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 KCNQ1P51787 676 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 PHC3Q8NDX5 983 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 PCYT2Q99447 389 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 GPER1Q99527 375 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 A0A0G2JLL6 359 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-202ENST00000369733 MITFO75030 526 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-202ENST00000369733 ITGA10O75578 1167 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 MATN4O95460 622 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 ADH1CP00326 375 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 PRNPP04156 253 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 ZNF806P0C7X5 589 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 KDELR2P33947 212 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 GALNT1Q10472 559 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-202ENST00000369733 DSG2Q14126 1118 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 PRRT2Q7Z6L0 340 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-202ENST00000369733 Q8N402 240 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 C2orf15Q8WU43 125 aaKnown RBP15.42■□□□□ 0.06
COL17A1-202ENST00000369733 CCDC107Q8WV48 283 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 TRIM2Q9C040 744 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 BTBD1Q9H0C5 482 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 OR2AG1Q9H205 316 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 BEX1Q9HBH7 125 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 IFT46Q9NQC8 304 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 ENPP5Q9UJA9 477 aa15.42■□□□□ 0.06
COL17A1-202ENST00000369733 ZNF3P17036 446 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 DDX6P26196 483 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 CD40LGP29965 261 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 RAB2AP61019 212 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 ADGRF1Q5T601 910 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 PRSS55Q6UWB4 352 aaPredicted RBP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 CYP4V2Q6ZWL3 525 aaPredicted RBP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 PRSS48Q7RTY5 328 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 ATCAYQ86WG3 371 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 COX18Q8N8Q8 333 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 FRS2Q8WU20 508 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 SH3YL1Q96HL8 342 aaPredicted RBP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 SUV39H2Q9H5I1 410 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 GKN1Q9NS71 199 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 ABCB8Q9NUT2 735 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 EXTL2Q9UBQ6 330 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 KDELR3O43731 214 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 GBAP04062 536 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 BCKDHAP12694 445 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 BDKRB1P46663 353 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 TAS2R50P59544 299 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 STXBP1P61764 594 aaKnown RBP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 TSPAN5P62079 268 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 RPS13P62277 151 aaKnown RBP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 NOXRED1Q6NXP6 359 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 SUSD3Q96L08 255 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 RBPJLQ9UBG7 517 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 PPIEQ9UNP9 301 aaKnown RBP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 ZSCAN5BA6NJL1 495 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 J3QLW9 94 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 ZNF19P17023 458 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 RPL17P18621 184 aaKnown RBP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 EDNRAP25101 427 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 OXTRP30559 389 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 DNAJA4Q8WW22 397 aaPredicted RBP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 RFT1Q96AA3 541 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 ZNF486Q96H40 463 aaPredicted RBP15.41■□□□□ 0.06
COL17A1-202ENST00000369733 ZSWIM3Q96MP5 696 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 AGPAT4Q9NRZ5 378 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 GADD45AP24522 165 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 XKR4Q5GH76 650 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 ATAT1Q5SQI0 421 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 PRAMEF17Q5VTA0 474 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 ZNF615Q8N8J6 731 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 SPERTQ8NA61 448 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 PLCL2Q9UPR0 1127 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 MYH11P35749 1972 aa15.41■□□□□ 0.06
COL17A1-202ENST00000369733 MAFKO60675 156 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 UPK1BO75841 260 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 BEST1O76090 585 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 PDYNP01213 254 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 C11orf91Q3C1V1 193 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 MEDAGQ5VYS4 303 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 SMYD5Q6GMV2 418 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 TRMT61BQ9BVS5 477 aaKnown RBP15.4■□□□□ 0.06
COL17A1-202ENST00000369733 UBQLN2Q9UHD9 624 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 CAPN5O15484 640 aaPredicted RBP15.4■□□□□ 0.06
COL17A1-202ENST00000369733 ARL6IP5O75915 188 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms