RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 SLC28A1O00337 649 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 ADORA3P0DMS8 318 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 DDX39BQ13838 428 aaKnown RBP15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 FLYWCH1Q4VC44 716 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 RUNDC3AQ59EK9 446 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 SVOPLQ8N434 492 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 APOLD1Q96LR9 279 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.43■□□□□ 0.065e-7■■■■■ 45.1
SYNCRIP-202ENST00000369622 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.43■□□□□ 0.066e-10■■■■■ 36.2
SYNCRIP-202ENST00000369622 KCNN2Q9H2S1 579 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 NMRK2Q9NPI5 230 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 ACOT13Q9NPJ3 140 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 C1orf109Q9NX04 203 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 MANBAO00462 879 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 ADAMTS4O75173 837 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 STK16O75716 305 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 CPSF4O95639 269 aaKnown RBP15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 SLC11A1P49279 550 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 GABARAPL2P60520 117 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 RPS14P62263 151 aaKnown RBP15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 MAD2L1Q13257 205 aaPredicted RBP15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 BAK1Q16611 211 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 CST9Q5W186 159 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 CACTIN-AS1Q8N1I8 211 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 ZBTB2Q8N680 514 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 AMER2Q8N7J2 671 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 ST13P5Q8NFI4 369 aaPredicted RBP15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 TESCQ96BS2 214 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 GPRC5BQ9NZH0 403 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 KIF17Q9P2E2 1029 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 CCL27Q9Y4X3 112 aa15.43■□□□□ 0.06
SYNCRIP-202ENST00000369622 A0A096LPI6 279 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 IFRD1O00458 451 aaPredicted RBP15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 RFXANKO14593 260 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 CD160O95971 181 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 HPRP00739 348 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 PDYNP01213 254 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 ITGALP20701 1170 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 C21orf33P30042 268 aaPredicted RBP15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 HMGCLP35914 325 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 TGFBR2P37173 567 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 RAB25P57735 213 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 NKX3-2P78367 333 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 PLD1Q13393 1074 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 CDH18Q13634 790 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 GPR68Q15743 365 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 CHRNA6Q15825 494 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 ADGRF1Q5T601 910 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 OR4F3Q6IEY1 312 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 NCEH1Q6PIU2 408 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 ZNF621Q6ZSS3 439 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 ANKS3Q6ZW76 656 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 RBFAQ8N0V3 343 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 TMEM132CQ8N3T6 1108 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 ATG16L2Q8NAA4 619 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 GIMAP1Q8WWP7 306 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 TTC9Q92623 222 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 TMEM80Q96HE8 168 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 PYURFQ96I23 114 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 GFM1Q96RP9 751 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 ABCG2Q9UNQ0 655 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 PCDHB7Q9Y5E2 793 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 PCDHB1Q9Y5F3 818 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 GMPPBQ9Y5P6 360 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 SCN10AQ9Y5Y9 1956 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 SMAD6O43541 496 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 EPHA2P29317 976 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 AQP1P29972 269 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 MRPL19P49406 292 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 FKBP1BP68106 108 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 ZNF45Q02386 682 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 MVKQ03426 396 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 KRR1Q13601 381 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 CARD16Q5EG05 197 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 LRRC73Q5JTD7 316 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 METTL2BQ6P1Q9 378 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 LINC00299Q6ZSB3 139 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 CEP68Q76N32 757 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 VTCN1Q7Z7D3 282 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 CYP4Z1Q86W10 505 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 ZFAND1Q8TCF1 268 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 AKAP1Q92667 903 aaKnown RBP eCLIP15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 MYO19Q96H55 970 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 TPD52L3Q96J77 140 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 RRAGCQ9HB90 399 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 IL26Q9NPH9 171 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 LRFN2Q9ULH4 789 aa15.42■□□□□ 0.06
SYNCRIP-202ENST00000369622 ZNF840PA6NDX5 716 aa15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 SLC10A3P09131 477 aa15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 TNNI3P19429 210 aa15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 RPIAP49247 311 aa15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 UBE3AQ05086 875 aa15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 SLC14A1Q13336 389 aa15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 NFATC2Q13469 925 aa15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 GALEQ14376 348 aa15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 ACOX1Q15067 660 aa15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 SF1Q15637 639 aaKnown RBP15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 CXorf57Q6NSI4 855 aaKnown RBP15.41■□□□□ 0.06
SYNCRIP-202ENST00000369622 KIAA1841Q6NSI8 718 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms