RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 IL36AQ9UHA7 158 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 BTBD3Q9Y2F9 522 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 COPG1Q9Y678 874 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CROCCQ5TZA2 2017 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 NOBOXO60393 691 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ATXN8OSP0DMR3 200 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 IL7P13232 177 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ENGP17813 658 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 TGM2P21980 687 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 CAPGP40121 348 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ARL1P40616 181 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 SEC13P55735 322 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 FOXK2Q01167 660 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF45Q02386 682 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 FADDQ13158 208 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 TOP3AQ13472 1001 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 SF3A2Q15428 464 aaKnown RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 DGUOKQ16854 277 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 STEAP3Q658P3 488 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 CES3Q6UWW8 571 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ARSKQ6UWY0 536 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 GDPD3Q7L5L3 318 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ADGRG3Q86Y34 549 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 EPHX4Q8IUS5 362 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 DSELQ8IZU8 1212 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 DEPDC4Q8N2C3 294 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 OR2AP1Q8NGE2 309 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 HTR3CQ8WXA8 447 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 GTF2H4Q92759 462 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ATOH1Q92858 354 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 YIPF6Q96EC8 236 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 SLC45A3Q96JT2 553 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 MBNL1Q9NR56 388 aaKnown RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ADGRE2Q9UHX3 823 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 LSM7Q9UK45 103 aaKnown RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 PCDHGA1Q9Y5H4 931 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 PQLC2LA1A4F0 135 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 RGSL1A5PLK6 1076 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 BTN3A1O00481 513 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 SOCS2O14508 198 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ABCD4O14678 606 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 SCAMP3O14828 347 aaKnown RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 LEFTY1O75610 366 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 JCHAINP01591 159 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 GP1BAP07359 652 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 FCGR1AP12314 374 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 MAOBP27338 520 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 MLLT3P42568 568 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 TSC22D1Q15714 1073 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 SETMARQ53H47 684 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 LGSNQ5TDP6 509 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 STPG1Q5TH74 334 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 RNF219Q5W0B1 726 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF776Q68DI1 518 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 OR7E24Q6IFN5 339 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ISLR2Q6UXK2 745 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF547Q8IVP9 402 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 OR8K5Q8NH50 307 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 FBLIM1Q8WUP2 373 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF566Q969W8 418 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 LINC00615Q96LM1 132 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF300Q96RE9 604 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 FUNDC2Q9BWH2 189 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 DSN1Q9H410 356 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 UCKL1Q9NWZ5 548 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 CD300AQ9UGN4 299 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 HSPE1-MOB4S4R3N1 261 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 LINC01387J3KSC0 135 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 TPP1O14773 563 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 PHGDHO43175 533 aaKnown RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 RFPL1O75677 317 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 TSPAN12O95859 305 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 H2AFB1P0C5Y9 115 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 H2AFB2P0C5Z0 115 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 CKMT1AP12532 417 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 EPHA8P29322 1005 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 EEF1DP29692 281 aaKnown RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 GABRA4P48169 554 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 STC1P52823 247 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 SLC10A7Q0GE19 358 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 BMPR2Q13873 1038 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ACOX1Q15067 660 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 LTB4RQ15722 352 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 SPATS1Q496A3 300 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 MSS51Q4VC12 460 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 CYBRD1Q53TN4 286 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 HACD2Q6Y1H2 254 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 CDHR3Q6ZTQ4 885 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF786Q8N393 782 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 SFRP1Q8N474 314 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 MCUQ8NE86 351 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 OR13J1Q8NGT2 312 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 CCDC124Q96CT7 223 aaKnown RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 MRGPRX2Q96LB1 330 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 FRMD8P1Q9BZ68 369 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ARRDC1-AS1Q9H2J1 176 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 LATS2Q9NRM7 1088 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 AGPAT4Q9NRZ5 378 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 FAM8A1Q9UBU6 413 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 GLS2Q9UI32 602 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms