RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 ZNF697Q5TEC3 545 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 SLCO4C1Q6ZQN7 724 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 TRAPPC5Q8IUR0 188 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 ABHD11Q8NFV4 315 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 DPH2Q9BQC3 489 aaPredicted RBP16.81■□□□□ 0.28
TRIM11-202ENST00000366699 ITM2CQ9NQX7 267 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 KRT84Q9NSB2 600 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 B3GNT3Q9Y2A9 372 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 GNG14A0A1W2PPG7 69 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 MRPS14O60783 128 aaKnown RBP16.81■□□□□ 0.28
TRIM11-202ENST00000366699 TFPTP0C1Z6 253 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 FMO3P31513 532 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 GPR1P46091 355 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 GALNT10Q86SR1 603 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 TMPRSS11BQ86T26 416 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 ATG16L2Q8NAA4 619 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 PHOSPHO2Q8TCD6 241 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 NEIL2Q969S2 332 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 SH3KBP1Q96B97 665 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 CCNB1IP1Q9NPC3 277 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 ERVK-18Q9QC07 812 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 FZD4Q9ULV1 537 aa16.81■□□□□ 0.28
TRIM11-202ENST00000366699 GABRR3A8MPY1 467 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 FOXE1O00358 373 aaPredicted RBP16.8■□□□□ 0.28
TRIM11-202ENST00000366699 YY2O15391 372 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 NFATC1O95644 943 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 TIA1P31483 386 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRIM11-202ENST00000366699 PHEXP78562 749 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 OCA2Q04671 838 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 NR1D2Q14995 579 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 KIAA1614Q5VZ46 1190 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 RAET1GQ6H3X3 334 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 PSRC1Q6PGN9 363 aaPredicted RBP16.8■□□□□ 0.28
TRIM11-202ENST00000366699 ZNF480Q8WV37 535 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 DYRK4Q9NR20 520 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 ADPRHL2Q9NX46 363 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 VPS4AQ9UN37 437 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 BTBD3Q9Y2F9 522 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 PCDHGA10Q9Y5H3 936 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 PCM1Q15154 2024 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 C17orf113A0A1B0GUU1 675 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 SLC22A1O15245 554 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 LZTS3O60299 673 aaPredicted RBP16.8■□□□□ 0.28
TRIM11-202ENST00000366699 GABARAPO95166 117 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 RPL3P39023 403 aaKnown RBP16.8■□□□□ 0.28
TRIM11-202ENST00000366699 TBPL1P62380 186 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 ELAVL3Q14576 367 aaKnown RBP16.8■□□□□ 0.28
TRIM11-202ENST00000366699 HNRNPA1L2Q32P51 320 aaKnown RBP16.8■□□□□ 0.28
TRIM11-202ENST00000366699 PDE12Q6L8Q7 609 aaKnown RBP16.8■□□□□ 0.28
TRIM11-202ENST00000366699 DCDC5Q6ZRR9 648 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 LINC00299Q6ZSB3 139 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 ZBTB46Q86UZ6 589 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 SVOPQ8N4V2 548 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 OR9A1PQ8NGU1 263 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 FOXJ1Q92949 421 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 ARMC5Q96C12 935 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 WDR34Q96EX3 536 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 ZNF347Q96SE7 839 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 OR2AG1Q9H205 316 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 EHD1Q9H4M9 534 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 TRIM39Q9HCM9 518 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 ATAD3AQ9NVI7 634 aa16.8■□□□□ 0.28
TRIM11-202ENST00000366699 THUMPD1Q9NXG2 353 aaKnown RBP16.8■□□□□ 0.28
TRIM11-202ENST00000366699 ZNF282Q9UDV7 671 aaPredicted RBP16.8■□□□□ 0.28
TRIM11-202ENST00000366699 J3QRK9 145 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 C9P02748 559 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 ABCB1P08183 1280 aaPredicted RBP16.79■□□□□ 0.28
TRIM11-202ENST00000366699 NR4A1P22736 598 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 ACVR2AP27037 513 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 IRS1P35568 1242 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 RXRGP48443 463 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 MLLT10P55197 1068 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 RAE1P78406 368 aaKnown RBP16.79■□□□□ 0.28
TRIM11-202ENST00000366699 DPTQ07507 201 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 EIF4HQ15056 248 aaKnown RBP16.79■□□□□ 0.28
TRIM11-202ENST00000366699 HKDC1Q2TB90 917 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 ZNF658BQ4V348 819 aaPredicted RBP16.79■□□□□ 0.28
TRIM11-202ENST00000366699 TCEAL5Q5H9L2 206 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 FAHD1Q6P587 224 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 TRMT11Q7Z4G4 463 aaKnown RBP16.79■□□□□ 0.28
TRIM11-202ENST00000366699 C12orf40Q86WS4 652 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 NPAS3Q8IXF0 933 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 PARP8Q8N3A8 854 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 VN1R2Q8NFZ6 395 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 SNRNP27Q8WVK2 155 aaKnown RBP16.79■□□□□ 0.28
TRIM11-202ENST00000366699 COQ8BQ96D53 544 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 TPD52L3Q96J77 140 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 LINC00615Q96LM1 132 aaPredicted RBP16.79■□□□□ 0.28
TRIM11-202ENST00000366699 EPYCQ99645 322 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 NECTIN3Q9NQS3 549 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 SIRT5Q9NXA8 310 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 DEC1Q9P2X7 70 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 GPR34Q9UPC5 381 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 TDRKHQ9Y2W6 561 aaKnown RBP16.79■□□□□ 0.28
TRIM11-202ENST00000366699 CORINQ9Y5Q5 1042 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 C1orf226A1L170 272 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 RNASET2O00584 256 aaKnown RBP16.79■□□□□ 0.28
TRIM11-202ENST00000366699 SUV39H1O43463 412 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 PCDH7O60245 1069 aa16.79■□□□□ 0.28
TRIM11-202ENST00000366699 ETHE1O95571 254 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms