RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 AP1S1P61966 158 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 PITPNAQ00169 270 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 PLA2G4EQ3MJ16 856 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 NOXRED1Q6NXP6 359 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 SLC5A8Q8N695 610 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 C7orf57Q8NEG2 295 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 PIGXQ8TBF5 258 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 TREX1Q9NSU2 369 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 TMEM45AQ9NWC5 275 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 EXTL2Q9UBQ6 330 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 STON1Q9Y6Q2 735 aa15.46■□□□□ 0.07
CLSTN1-201ENST00000361311 A0A1W2PQ09 198 aa15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 MANSC4A6NHS7 340 aaPredicted RBP15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 TNFRSF10AO00220 468 aa15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 TNFSF8P32971 234 aa15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 IRAK1BP1Q5VVH5 260 aa15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 ZNF598Q86UK7 904 aaKnown RBP15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 KIF18BQ86Y91 864 aa15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 SIMC1Q8NDZ2 872 aa15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 DUS3LQ96G46 650 aaKnown RBP15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 TRPS1Q9UHF7 1281 aa15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 STUB1Q9UNE7 303 aa15.46■□□□□ 0.06
CLSTN1-201ENST00000361311 ALPIP09923 528 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 LCN1P31025 176 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 CLDN8P56748 225 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 RGS8P57771 180 aaPredicted RBP15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 USP41Q3LFD5 358 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 MS4A13Q5J8X5 152 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 ATAT1Q5SQI0 421 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 FAM109AQ8N4B1 249 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 TTLL2Q9BWV7 592 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 MYO10Q9HD67 2058 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 ENTPD6O75354 484 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 PRSS56P0CW18 603 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 SEMG2Q02383 582 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 ANKRD54Q6NXT1 300 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 LINGO2Q7L985 606 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 PTRH1Q86Y79 214 aaKnown RBP15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 LACC1Q8IV20 430 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 CREB3L1Q96BA8 519 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 CCM2Q9BSQ5 444 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 ABCG5Q9H222 651 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 RANGRFQ9HD47 186 aaPredicted RBP15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 PPIEQ9UNP9 301 aaKnown RBP15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 RPN2P04844 631 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 RPS17P08708 135 aaKnown RBP15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 AKR1A1P14550 325 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 PIGAP37287 484 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 RGS6P49758 472 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 FBXW4P57775 412 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 TSPAN5P62079 268 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 FGFBP1Q14512 234 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 RNF180Q86T96 592 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 RAD51AP1Q96B01 352 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 TBX5Q99593 518 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 TMEM248Q9NWD8 314 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 SARDHQ9UL12 918 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 ERVW-1Q9UQF0 538 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 TMEM98Q9Y2Y6 226 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 OR6C75A6NL08 312 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 CPSF4LA6NMK7 179 aaKnown RBP15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 H3BM21 787 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 KMOO15229 486 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 APOL3O95236 402 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 PFKLP17858 780 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 CELP19835 753 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 SMSP52788 366 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 CRISP1P54107 249 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 TMEM44Q2T9K0 475 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 UMODL1-AS1Q8N2C9 162 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 TMEM151AQ8N4L1 468 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 ASF1AQ9Y294 204 aa15.45■□□□□ 0.06
CLSTN1-201ENST00000361311 A0A0G2JPF8 293 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 HNRNPCL3B7ZW38 293 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 SAP18O00422 153 aaKnown RBP15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 IQCF3P0C7M6 154 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 HNRNPCL4P0DMR1 293 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 HNMTP50135 292 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 TBCEQ15813 527 aaPredicted RBP15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 ZNF630Q2M218 657 aaPredicted RBP15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 GPR33Q49SQ1 333 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 C9orf64Q5T6V5 341 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 KCTD11Q693B1 232 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 PLCZ1Q86YW0 608 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 EQTNQ9NQ60 294 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 RABL2BQ9UNT1 228 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 ECM29Q5VYK3 1845 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 PRAMEF11O60813 436 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 TOXO94900 526 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 RAB36O95755 333 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 EIF2DP41214 584 aaKnown RBP15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 SSR2P43308 183 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 ARCN1P48444 511 aaKnown RBP15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 PCDH1Q08174 1060 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 PM20D1Q6GTS8 502 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 MOB2Q70IA6 237 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 METTL3Q86U44 580 aaKnown RBP15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 SLC30A8Q8IWU4 369 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 UBXN10Q96LJ8 280 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms