RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ZNF674Q2M3X9 581 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 SERPINA9Q86WD7 417 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ZSWIM9Q86XI8 627 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 NRSN1Q8IZ57 195 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PROKR1Q8TCW9 393 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PLD4Q96BZ4 506 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 INPP4AQ96PE3 977 aaPredicted RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 MYOCQ99972 504 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PLEKHM1Q9Y4G2 1056 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 MYO9BQ13459 2157 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 GPR68Q15743 365 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 COMMD7Q86VX2 200 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ACER1Q8TDN7 264 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 MKS1Q9NXB0 559 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PAQR5Q9NXK6 330 aaPredicted RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 NRXN1Q9ULB1 1477 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 SULT1C2O00338 296 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 MMP8P22894 467 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 MAP2K3P46734 347 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 NDST2P52849 883 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ELOAQ14241 798 aaKnown RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 MFSD13AQ14CX5 517 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PON2Q15165 354 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 SSX2Q16385 188 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 DGAT2Q96PD7 388 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ADGRB1O14514 1584 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 CLIC1O00299 241 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 OR8U9P0C7N5 309 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PSRC1Q6PGN9 363 aaPredicted RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ANKS1BQ7Z6G8 1248 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 C2orf73Q8N5S3 287 aaPredicted RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 DDX4Q9NQI0 724 aaKnown RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 SRRDQ9UH36 339 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 NDUFS4O43181 175 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 CBSLP0DN79 551 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 CBSP35520 551 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ACSBG2Q5FVE4 666 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 OR56A1Q8NGH5 318 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 JPH3Q8WXH2 748 aaPredicted RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 TPT1P8Q9HAU6 139 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ADAM18Q9Y3Q7 739 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 LMO7Q8WWI1 1683 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 GABRDO14764 452 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 MATN3O15232 486 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 SLC6A6P31641 620 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 PLA2G16P53816 162 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 PIGGQ5H8A4 983 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 DPY19L3Q6ZPD9 716 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 TREML1Q86YW5 311 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 GFOD1Q9NXC2 390 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 TOXO94900 526 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 PBX3P40426 434 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 DEFA6Q01524 100 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 RABL3Q5HYI8 236 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 LILRB2Q8N423 598 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 PREBQ9HCU5 417 aa9.02□□□□□ -0.96
VPS13A-203ENST00000360280 F8W036 122 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CTNNB1P35222 781 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 RPS3AP61247 264 aaKnown RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 BLOC1S1P78537 153 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 NIPAL4Q0D2K0 466 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 MLC1Q15049 377 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 DECR1Q16698 335 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF675Q8TD23 568 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CPT1BQ92523 772 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 SLC6A16Q9GZN6 736 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 OXSR1O95747 527 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 JUNP05412 331 aaKnown RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CERS1P27544 350 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 PTP4A2Q12974 167 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 PLA2G15Q8NCC3 412 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 RHOQP17081 205 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 NDUFS1P28331 727 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 KLF1Q13351 362 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 TTPALQ9BTX7 342 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 MTFR1LQ9H019 292 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 COL20A1Q9P218 1284 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 UBE2Q2LH0YL09 131 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CLDN5O00501 218 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 FAM124AQ86V42 546 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 FIBCD1Q8N539 461 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 SPPL2BQ8TCT7 592 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 GBA2Q9HCG7 927 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 VPS29Q9UBQ0 182 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 SPATA31A6Q5VVP1 1343 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 PRR36Q9H6K5 1346 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 OTOFQ9HC10 1997 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 LRRTM2O43300 516 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 IRF5Q13568 498 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 GK2Q14410 553 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 TMEM53Q6P2H8 277 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 RBM12BQ8IXT5 1001 aaKnown RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 CRYBB1P53674 252 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 ANKRD23Q86SG2 305 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 BANPQ8N9N5 519 aa9.02□□□□□ -0.97
VPS13A-203ENST00000360280 SIDT2Q8NBJ9 832 aaKnown RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 SECISBP2Q96T21 854 aaKnown RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 WRAP53Q9BUR4 548 aaKnown RBP9.02□□□□□ -0.97
VPS13A-203ENST00000360280 EFCAB11Q9BUY7 163 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms