RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 BBS7Q8IWZ6 715 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 MFSD4AQ8N468 514 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 RAB8BQ92930 207 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 WBP2Q969T9 261 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 NECTIN4Q96NY8 510 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF300Q96RE9 604 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 CDK5RAP1Q96SZ6 601 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 YME1L1Q96TA2 773 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 COQ7Q99807 217 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 ABT1Q9ULW3 272 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 RUVBL1Q9Y265 456 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 DYRK1BQ9Y463 629 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 SLC35F4A4IF30 521 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 FABP12A6NFH5 140 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 CLCA1A8K7I4 914 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 ANKRD28O15084 1053 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 PLOD3O60568 738 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 IFNA14P01570 189 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 HOXD8P13378 290 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 SLC19A1P41440 591 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 TGM4P49221 684 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 CRISP3P54108 245 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 MC1RQ01726 317 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF45Q02386 682 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 GPR17Q13304 367 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 QPRTQ15274 297 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF284Q2VY69 593 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 LEXMQ3ZCV2 418 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 LAIR1Q6GTX8 287 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 ADNP2Q6IQ32 1131 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 LAIR2Q6ISS4 152 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 PLET1Q6UQ28 207 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 MRPL10Q7Z7H8 261 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 RNF180Q86T96 592 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 NPAS3Q8IXF0 933 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 GPR26Q8NDV2 337 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 B3GNT7Q8NFL0 401 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 C17orf50Q8WW18 174 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 VMP1Q96GC9 406 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 NIPSNAP1Q9BPW8 284 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 SLC29A3Q9BZD2 475 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 SLIRPQ9GZT3 109 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 DUSP21Q9H596 190 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 MOV10Q9HCE1 1003 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 NUFIP1Q9UHK0 495 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 ATP6V1HQ9UI12 483 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 CLEC4AQ9UMR7 237 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 CFL2Q9Y281 166 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 TRBC2A0A5B9 178 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 OR2A25A4D2G3 310 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 FADS2P1A8MWK0 482 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 PLK4O00444 970 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 SYN3O14994 580 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 KCNK5O95279 499 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 STATHP02808 62 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 IFNW1P05000 195 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 ANXA8P13928 327 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 MYL12AP19105 171 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 CCR7P32248 378 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 CNR2P34972 360 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 SNRPD1P62314 119 aaKnown RBP6.34□□□□□ -1.4
CSDE1-203ENST00000358528 SNRPD2P62316 118 aaKnown RBP6.34□□□□□ -1.4
CSDE1-203ENST00000358528 RING1Q06587 406 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 HSPB3Q12988 150 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 KEAP1Q14145 624 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 NFE2L1Q14494 772 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 C5orf22Q49AR2 442 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 ZC3H12BQ5HYM0 836 aaKnown RBP6.34□□□□□ -1.4
CSDE1-203ENST00000358528 SNAP47Q5SQN1 464 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF362Q5T0B9 420 aaPredicted RBP6.34□□□□□ -1.4
CSDE1-203ENST00000358528 KDM4DQ6B0I6 523 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 TRIM40Q6P9F5 258 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 RSPO2Q6UXX9 243 aaPredicted RBP6.34□□□□□ -1.4
CSDE1-203ENST00000358528 THOC6Q86W42 341 aaKnown RBP6.34□□□□□ -1.4
CSDE1-203ENST00000358528 CYP4Z2PQ8N1L4 340 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 TCEANCQ8N8B7 351 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 ZFP41Q8N8Y5 198 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 PJA1Q8NG27 643 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 XAGE5Q8WWM1 108 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 OMA1Q96E52 524 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 YIPF6Q96EC8 236 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 DOHHQ9BU89 302 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 ARHGAP39Q9C0H5 1083 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 SMG9Q9H0W8 520 aaKnown RBP6.34□□□□□ -1.4
CSDE1-203ENST00000358528 SP140LQ9H930 580 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 ZDHHC3Q9NYG2 299 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 KIAA1522Q9P206 1035 aaPredicted RBP6.34□□□□□ -1.4
CSDE1-203ENST00000358528 CFAP97Q9P2B7 532 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 IFT52Q9Y366 437 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 SPIN1Q9Y657 262 aaPredicted RBP6.34□□□□□ -1.4
CSDE1-203ENST00000358528 KCNE2Q9Y6J6 123 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 CLCA3PQ9Y6N3 262 aa6.34□□□□□ -1.4
CSDE1-203ENST00000358528 ISPDA4D126 451 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 NPIPB15A6NHN6 443 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 FAM47E-STBD1D6RA91 191 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 E7EQ34 232 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PCDH17O14917 1159 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 CASKO14936 926 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 KCNK2O95069 426 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 ADORA3P0DMS8 318 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms