RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CYTH4Q9UIA0 394 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 OARD1Q9Y530 152 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 A0A1W2PQ45 241 aaPredicted RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 A0A1W2PQY0 241 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 CAPN5O15484 640 aaPredicted RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 ADH1BP00325 375 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 GJA1P17302 382 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 UQCRC2P22695 453 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 MAP3K8P41279 467 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 APLP1P51693 650 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 TPTEP56180 551 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 UPP1Q16831 310 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 EIF5AL1Q6IS14 154 aaKnown RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 MAMDC4Q6UXC1 1216 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 LINGO2Q7L985 606 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 ZFAND4Q86XD8 727 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 MARCH9Q86YJ5 346 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 IGDCC3Q8IVU1 814 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 PNLDC1Q8NA58 520 aaKnown RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 TMEM80Q96HE8 168 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 KCNC2Q96PR1 638 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 MMP27Q9H306 513 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 C11orf49Q9H6J7 331 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 IFT52Q9Y366 437 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 PSAT1Q9Y617 370 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 MAP1BP46821 2468 aaKnown RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 A0A1W2PRQ8 180 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF670-ZNF695F2Z2N8 137 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 S100A6P06703 90 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 CD1DP15813 335 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 DCDC1P59894 354 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 NFATC2Q13469 925 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 SMU1Q2TAY7 513 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 IQCHQ86VS3 1027 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 MMAAQ8IVH4 418 aaKnown RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 OR5P2Q8WZ92 322 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 TRMT61BQ9BVS5 477 aaKnown RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 ADAMTS10Q9H324 1103 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 SDHAF3Q9NRP4 125 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 TBCCD1Q9NVR7 557 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 B4GALT6Q9UBX8 382 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 BAIAP2Q9UQB8 552 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 PCDHGB5Q9Y5G0 923 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 HSPE1-MOB4S4R3N1 261 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 PLCH1Q4KWH8 1693 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 NDUFS4O43181 175 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 APOC1P02654 83 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 ALDOAP04075 364 aaKnown RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 RPL19P84098 196 aaKnown RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 ADAM15Q13444 863 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 B3GNT9Q6UX72 402 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 SLC36A4Q6YBV0 504 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 WDTC1Q8N5D0 677 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 TRAM1L1Q8N609 369 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 OR9I1Q8NGQ6 314 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 NFKBIDQ8NI38 313 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 C1orf216Q8TAB5 229 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 ZFP3Q96NJ6 502 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 KXD1Q9BQD3 176 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 ADAM7Q9H2U9 754 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 PLOD2O00469 737 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 TPST2O60704 377 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 CNTN5O94779 1100 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 KAT7O95251 611 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 PENKP01210 267 aaPredicted RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 MAT2AP31153 395 aaKnown RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 SLC6A6P31641 620 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 SHMT2P34897 504 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 CDH11P55287 796 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 TRAM1Q15629 374 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 LDLRAD1Q5T700 205 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 KIAA1161Q6NSJ0 714 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 NANOGP8Q6NSW7 305 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 RPL13AP3Q6NVV1 102 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 SERINC5Q86VE9 423 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 TICAM1Q8IUC6 712 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 CMTM8Q8IZV2 173 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 FBXO15Q8NCQ5 510 aaPredicted RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 HCAR2Q8TDS4 363 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 PKP4Q99569 1192 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF395Q9H8N7 513 aaPredicted RBP11.37□□□□□ -0.59
COL9A1-202ENST00000357250 NANOGQ9H9S0 305 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF639Q9UID6 485 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 PHF24Q9UPV7 400 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 LIPT1Q9Y234 373 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 RNF11Q9Y3C5 154 aa11.37□□□□□ -0.59
COL9A1-202ENST00000357250 MID1O15344 667 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 CNMDO75829 334 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 BEST1O76090 585 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 YES1P07947 543 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 TYRP14679 529 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 HOXC12P31275 282 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 GRIA2P42262 883 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 OR3A3P47888 321 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 OR3A2P47893 321 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 DECR1Q16698 335 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 CMPK2Q5EBM0 449 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 SLC29A4Q7RTT9 530 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 CLDN19Q8N6F1 224 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 AQP11Q8NBQ7 271 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms