RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 REEP3Q6NUK4 255 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 HERVK_113Q902F9 699 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 SMPDL3AQ92484 453 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 OSTF1Q92882 214 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 RFT1Q96AA3 541 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 ABCG4Q9H172 646 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 PAK1IP1Q9NWT1 392 aaPredicted RBP14.39□□□□□ -0.11
CHD4-201ENST00000357008 PCDHGB2Q9Y5G2 931 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 M0R233 179 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 SLC31A1O15431 190 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 DGKEP52429 567 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 LSAMPQ13449 338 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 PPP1R3AQ16821 1122 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 GOLM1Q8NBJ4 401 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 KCT2Q8NC54 265 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 SUSD3Q96L08 255 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 KCNH6Q9H252 994 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 PCDHB3Q9Y5E6 796 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 SLIT2O94813 1529 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 TMEM150CB9EJG8 249 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 NDUFS1P28331 727 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 GRIA2P42262 883 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 TAS2R50P59544 299 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 BTN3A2P78410 334 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 ENPP2Q13822 863 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 GRK1Q15835 563 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 MAPK14Q16539 360 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 DNM1P34Q6PK57 102 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 AKAP1Q92667 903 aaKnown RBP eCLIP14.39□□□□□ -0.114e-9■■□□□ 11.7
CHD4-201ENST00000357008 TRIM43Q96BQ3 446 aaPredicted RBP14.39□□□□□ -0.11
CHD4-201ENST00000357008 NOP16Q9Y3C1 178 aaKnown RBP14.39□□□□□ -0.11
CHD4-201ENST00000357008 ASB3Q9Y575 518 aa14.39□□□□□ -0.11
CHD4-201ENST00000357008 TFPTP0C1Z6 253 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 VAMP1P23763 118 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 HLCSP50747 726 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 GNG2P59768 71 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 SLC7A6OSQ96CW6 309 aaPredicted RBP14.38□□□□□ -0.11
CHD4-201ENST00000357008 NLGN3Q9NZ94 848 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 LRRN3E7EW58 273 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 MTX2O75431 263 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 EPOP01588 193 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 HSDL2Q6YN16 418 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 OR52E4Q8NGH9 312 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 OR2L8Q8NGY9 312 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 OR2L2Q8NH16 312 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 SLC25A36Q96CQ1 311 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 LRRN3Q9H3W5 708 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 CLDN7O95471 211 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 OAS1P00973 400 aaKnown RBP14.38□□□□□ -0.11
CHD4-201ENST00000357008 ALDOAP04075 364 aaKnown RBP14.38□□□□□ -0.11
CHD4-201ENST00000357008 RPA4Q13156 261 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 PTGR1Q14914 329 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 CMPK2Q5EBM0 449 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 CDCA2Q69YH5 1023 aaPredicted RBP14.38□□□□□ -0.11
CHD4-201ENST00000357008 AGTRAPQ6RW13 159 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 SCML4Q8N228 414 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 SNIP1Q8TAD8 396 aaKnown RBP14.38□□□□□ -0.11
CHD4-201ENST00000357008 THRSPQ92748 146 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 CENPMQ9NSP4 180 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 CLDN19Q8N6F1 224 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 EPYCQ99645 322 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 NLE1Q9NVX2 485 aaPredicted RBP14.38□□□□□ -0.11
CHD4-201ENST00000357008 CNOT11Q9UKZ1 510 aaKnown RBP14.38□□□□□ -0.11
CHD4-201ENST00000357008 SCML2Q9UQR0 700 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 C6orf47O95873 294 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 C8AP07357 584 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 GXYLT1Q4G148 440 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 TICAM1Q8IUC6 712 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 ZNF101Q8IZC7 436 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 CNIH3Q8TBE1 160 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 GKN1Q9NS71 199 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 IL36AQ9UHA7 158 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 MYO5BQ9ULV0 1848 aa14.38□□□□□ -0.11
CHD4-201ENST00000357008 PROM1O43490 865 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 FKTNO75072 461 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 ZNF30P17039 623 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 ZNF81P51508 661 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 ARSIQ5FYB1 569 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 TMIGD1Q6UXZ0 262 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 TPRG1Q6ZUI0 275 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 TMED4Q7Z7H5 227 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 STOML3Q8TAV4 291 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 ZNF384Q8TF68 577 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 SLC38A3Q99624 504 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 OR51I1Q9H343 314 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 WDR26Q9H7D7 661 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 TAC3Q9UHF0 121 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 RHPN2P1A8MT19 583 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 H7C2Y5 167 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 ELNP15502 786 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 VIPR1P32241 457 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 NOGQ13253 232 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 PIGGQ5H8A4 983 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 OGFRL1Q5TC84 451 aaPredicted RBP14.37□□□□□ -0.11
CHD4-201ENST00000357008 JAGN1Q8N5M9 183 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 GAL3ST3Q96A11 431 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 TBL1XR1Q9BZK7 514 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 MINDY3Q9H8M7 445 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 MEAF6Q9HAF1 191 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 FLRT2O43155 660 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms