RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 DSELQ8IZU8 1212 aa17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 WDR48Q8TAF3 677 aa17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 BAHD1Q8TBE0 780 aaPredicted RBP17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 ZUFSPQ96AP4 578 aa17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 F2RL3Q96RI0 385 aa17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 DUSP23Q9BVJ7 150 aa17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 EBPLQ9BY08 206 aa17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 ANKMY1Q9P2S6 941 aa17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 PILRAQ9UKJ1 303 aa17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 PADI4Q9UM07 663 aa17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 RUVBL1Q9Y265 456 aaKnown RBP17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 PCDHGA5Q9Y5G8 931 aa17.35■□□□□ 0.37
SMARCD3-202ENST00000356800 DYTNA2CJ06 578 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 FAM234BA2RU67 622 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 SIGLEC6O43699 453 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 PRPS2P11908 318 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 ENGP17813 658 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 MAPK1P28482 360 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 ALDH4A1P30038 563 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 HNRNPH1P31943 449 aaKnown RBP17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 RAP1GDS1P52306 607 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 HYAL2Q12891 473 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 ART3Q13508 389 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 NR1D2Q14995 579 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 SPIN4Q56A73 249 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 PLA2G2CQ5R387 149 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 KHDRBS2Q5VWX1 349 aaKnown RBP17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 NKAIN2Q5VXU1 208 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 REP15Q6BDI9 236 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 HACD2Q6Y1H2 254 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 COMMD6Q7Z4G1 85 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 VN1R4Q7Z5H5 301 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 FAM9CQ8IZT9 166 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 METTL4Q8N3J2 472 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 TTLQ8NG68 377 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 CLHC1Q8NHS4 586 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 MACROD1Q9BQ69 325 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 GTPBP2Q9BX10 602 aaKnown RBP17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 SEMA6CQ9H3T2 930 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 NMRK1Q9NWW6 199 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 SIRT5Q9NXA8 310 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 NDUFAF1Q9Y375 327 aa17.34■□□□□ 0.37
SMARCD3-202ENST00000356800 CACNA1HO95180 2353 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 UNC13CQ8NB66 2214 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 IGHV1OR21-1A0A087WYE8 117 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 NR5A2O00482 541 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 B4GAT1O43505 415 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 KLHL18O94889 574 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 ST6GAL1P15907 406 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 POLR2JP52435 117 aaKnown RBP17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 GFERP55789 205 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 RPS15AP62244 130 aaKnown RBP17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 MMEL1Q495T6 779 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 IRGCQ6NXR0 463 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 GALNT18Q6P9A2 607 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 DEFB107AQ8IZN7 70 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 PGAM4Q8N0Y7 254 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 TBC1D19Q8N5T2 526 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 GLB1L3Q8NCI6 653 aaPredicted RBP17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 FAM13CQ8NE31 585 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 SPDL1Q96EA4 605 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 EGLN2Q96KS0 407 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 TSSK3Q96PN8 268 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 NPAS2Q99743 824 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 THTPAQ9BU02 230 aa17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 SORBS1Q9BX66 1292 aaKnown RBP17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 ZNF717Q9BY31 904 aaPredicted RBP17.33■□□□□ 0.37
SMARCD3-202ENST00000356800 A0A1W2PP18 115 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 LRIT2A6NDA9 550 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 PLPP1O14494 284 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 CASC3O15234 703 aaKnown RBP17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 CAPN5O15484 640 aaPredicted RBP17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 SERPIND1P05546 499 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 ALPPL2P10696 532 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 CAPN3P20807 821 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 GSTM2P28161 218 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 TIA1P31483 386 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 GPR3P46089 330 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 KCNK10P57789 538 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 CFHR1Q03591 330 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 VPS26BQ4G0F5 336 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 UBE3DQ7Z6J8 389 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 EID2Q8N6I1 236 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 KRTCAP2Q8N6L1 136 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 FAM181AQ8N9Y4 354 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 PCYOX1LQ8NBM8 494 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 TRAPPC9Q96Q05 1148 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 OR2A5Q96R48 311 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 KLHL31Q9H511 634 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 LHX9Q9NQ69 397 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 PRPF19Q9UMS4 504 aaKnown RBP17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 A0A088AWK7 358 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 C4orf51C9J302 202 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 MRASO14807 208 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 NDUFS4O43181 175 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 KIF1CO43896 1103 aaKnown RBP17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 SH3BP5O60239 455 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 PCDHGA12O60330 932 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 SEMA3DO95025 777 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 CDH3P22223 829 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms