RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SCGB2B2Q4G0G5 96 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 ZNF782Q6ZMW2 699 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-202ENST00000355133 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-202ENST00000355133 HRASLS2Q9NWW9 162 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 GNG8Q9UK08 70 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 DLGAP4Q9Y2H0 992 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 LCHNA4D1U4 455 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 IL33O95760 270 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 CSTBP04080 98 aaKnown RBP12.8□□□□□ -0.36
SCN8A-202ENST00000355133 RNF144AP50876 292 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-202ENST00000355133 SNTA1Q13424 505 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 UPP1Q16831 310 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 LRCH3Q96II8 777 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 ITGB1BP2Q9UKP3 347 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 SH3D21A4FU49 640 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 SLC35F4A4IF30 521 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 SEMA3DO95025 777 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 APOC1P02654 83 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 PFKMP08237 780 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 VSX2P58304 361 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-202ENST00000355133 EPGNQ6UW88 154 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-202ENST00000355133 SLITRK4Q8IW52 837 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 PHTF2Q8N3S3 785 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 P2RY13Q9BPV8 354 aa12.8□□□□□ -0.36
SCN8A-202ENST00000355133 EIF3KQ9UBQ5 218 aaKnown RBP12.8□□□□□ -0.36
SCN8A-202ENST00000355133 MYOCOSA0A1B0GUC4 107 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 C2orf92A0A1B0GVN3 265 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 TLX2O43763 284 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 AKAP8O43823 692 aaKnown RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 CREG1O75629 220 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 FCER2P06734 321 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 FHP07954 510 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 HNF1BP35680 557 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 CAPZA1P52907 286 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 PDSS1Q5T2R2 415 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 PRAMEF17Q5VTA0 474 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 GALNT15Q8N3T1 639 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 C2CD4AQ8NCU7 369 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 SCAMP4Q969E2 229 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 ZNF641Q96N77 438 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 C19orf25Q9UFG5 118 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 RLN2P04090 185 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 JMJD7P0C870 316 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 PRKACGP22612 351 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 PRKCDQ05655 676 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 LAPTM4AQ15012 233 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 TSTQ16762 297 aaKnown RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 SLC35G1Q2M3R5 365 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 RABL3Q5HYI8 236 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 OR4K1Q8NGD4 311 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 RAB8BQ92930 207 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 GAL3ST3Q96A11 431 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 MMABQ96EY8 250 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 ALPK1Q96QP1 1244 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 BARD1Q99728 777 aaKnown RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 TOR3AQ9H497 397 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 GRHPRQ9UBQ7 328 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 PCDHGB1Q9Y5G3 927 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 PAMR1Q6UXH9 720 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 ERN2Q76MJ5 926 aaKnown RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 CD180Q99467 661 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 TTTY10Q9BZA0 68 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 FAM120CQ9NX05 1096 aaKnown RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 MEMO1Q9Y316 297 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 A0A1W2PP55 124 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 ITGA5P08648 1049 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 SLC6A4P31645 630 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 LMAN2Q12907 356 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 MR1Q95460 341 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 TMCO6Q96DC7 493 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 TSSK6Q9BXA6 273 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 C12orf4Q9NQ89 552 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 LOC100130705A0A1B0GUX0 176 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 FAM72CH0Y354 149 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 SLC2A2P11168 524 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 CCINQ13939 588 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 PON3Q15166 354 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 PLEKHG6Q3KR16 790 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 ZNF678Q5SXM1 525 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 FAM72AQ5TYM5 149 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 FAM72DQ6L9T8 149 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 ZNF572Q7Z3I7 529 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-202ENST00000355133 FAM72BQ86X60 149 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 BIRC7Q96CA5 298 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 HSPBAP1Q96EW2 488 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 SPHK2Q9NRA0 654 aa12.79□□□□□ -0.36
SCN8A-202ENST00000355133 VILLO15195 856 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 KAT7O95251 611 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 AHSA1O95433 338 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 CDH15P55291 814 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 BLMHQ13867 455 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 TMEM125Q96AQ2 219 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 HERC2P3Q9BVR0 1158 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 MND1Q9BWT6 205 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 CYTH4Q9UIA0 394 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 SMAD9O15198 467 aaKnown RBP12.78□□□□□ -0.36
SCN8A-202ENST00000355133 HCKP08631 526 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 IFI30P13284 250 aa12.78□□□□□ -0.36
SCN8A-202ENST00000355133 CSF2RAP15509 400 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms