RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 DTD2Q96FN9 168 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 RADILQ96JH8 1075 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 GATA5Q9BWX5 397 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 FAM83DQ9H4H8 585 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 GPN2Q9H9Y4 310 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 SMURF2Q9HAU4 748 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 SLAMF7Q9NQ25 335 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 IGSF5Q9NSI5 407 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 TMEM9Q9P0T7 183 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 PTBP2Q9UKA9 531 aaKnown RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 WBP11Q9Y2W2 641 aaKnown RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ACOT9Q9Y305 439 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 PCDHB1Q9Y5F3 818 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 LRRK1Q38SD2 2015 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 SERPINI2O75830 405 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 TFEBP19484 476 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 HTR3AP46098 478 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 SMSP52788 366 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 PPP5CP53041 499 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 GP2P55259 537 aaKnown RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 AGERQ15109 404 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 METTL2BQ6P1Q9 378 aaKnown RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 C16orf62Q7Z3J2 963 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 OR8H1Q8NGG4 311 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 ST6GAL2Q96JF0 529 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 BDH2Q9BUT1 245 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 GHITMQ9H3K2 345 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 CPNE5Q9HCH3 593 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 CD274Q9NZQ7 290 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 CNOT11Q9UKZ1 510 aaKnown RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 HSPB11Q9Y547 144 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 OAS3Q9Y6K5 1087 aaKnown RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 EVPLLA8MZ36 301 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 WWP2O00308 870 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 CTDSP2O14595 271 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 WNT9AO14904 365 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 ABCB7O75027 752 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 FADS2O95864 444 aaKnown RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 PKMP14618 531 aaKnown RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 HOXB2P14652 356 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 CLK1P49759 484 aaKnown RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 DPTQ07507 201 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 LAPTM5Q13571 262 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF460Q14592 562 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 STARD3Q14849 445 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 PYCR3Q53H96 274 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 RBFAQ8N0V3 343 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 OR8H3Q8N146 312 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 LILRB2Q8N423 598 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 CNIH3Q8TBE1 160 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 KCNJ9Q92806 393 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 RNF145Q96MT1 663 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 PHOX2BQ99453 314 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 ILKAPQ9H0C8 392 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 ABCG8Q9H221 673 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 PRDM6Q9NQX0 595 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 MRPL39Q9NYK5 338 aaKnown RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 TARM1B6A8C7 271 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 PRMT5O14744 637 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 TSPAN6O43657 245 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 APOA1P02647 267 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 HTR1AP08908 422 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 CYP4B1P13584 511 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 FOSL1P15407 271 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF7P17097 686 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 IL10P22301 178 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 PRKACGP22612 351 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 B4GALNT1Q00973 533 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 BTBD16Q32M84 506 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 C6orf10Q5SRN2 563 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 MACC1Q6ZN28 852 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 TMEM126BQ8IUX1 230 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 RHOXF1Q8NHV9 184 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 SLC22A8Q8TCC7 542 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 TOE1Q96GM8 510 aaKnown RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 BOCQ9BWV1 1114 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 ASPSCR1Q9BZE9 553 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 LATS2Q9NRM7 1088 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 ZDHHC3Q9NYG2 299 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 TAS2R9Q9NYW1 312 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 SERGEFQ9UGK8 458 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 CD84Q9UIB8 345 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 CRLS1Q9UJA2 301 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 RNF112Q9ULX5 631 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 MMP17Q9ULZ9 603 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 FNDC3AQ9Y2H6 1198 aaKnown RBP9.75□□□□□ -0.85
SYNE1-203ENST00000354674 KLHL20Q9Y2M5 609 aa9.75□□□□□ -0.85
SYNE1-203ENST00000354674 MYO10Q9HD67 2058 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 SOD1P00441 154 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 SBK3P0C264 359 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 C6P13671 934 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 FMO3P31513 532 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 GPR85P60893 370 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 EOGTQ5NDL2 527 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 SHEQ5VZ18 495 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF852Q6ZMS4 543 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 DGLUCYQ7Z3D6 616 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 SYNPOQ8N3V7 929 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 MINDY2Q8NBR6 621 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms