RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 TRIM46Q7Z4K8 759 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SPRED1Q7Z699 444 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 OAFQ86UD1 273 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 NRROSQ86YC3 692 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 BEST3Q8N1M1 668 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SAMD12Q8N8I0 201 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 OR6F1Q8NGZ6 308 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 GPR151Q8TDV0 419 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 GTPBP3Q969Y2 492 aaKnown RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 TIFAQ96CG3 184 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 FAM84BQ96KN1 310 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 TCF25Q9BQ70 676 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 DUSP22Q9NRW4 184 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 PRMT7Q9NVM4 692 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 U3KQ87 197 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 MAGEB17A8MXT2 336 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 LRRTM2O43300 516 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 IL1AP01583 271 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 NOS2P35228 1153 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 KCNC1P48547 511 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 AMHR2Q16671 573 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SKA3Q8IX90 412 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 FAM83FQ8NEG4 500 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 OR52J3Q8NH60 311 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ADAMTS19Q8TE59 1207 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 USP7Q93009 1102 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TMEM203Q969S6 136 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 MARVELD3Q96A59 401 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 RPRD1AQ96P16 312 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 TRIM2Q9C040 744 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 PITHD1Q9GZP4 211 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 RNF32Q9H0A6 362 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ACOT13Q9NPJ3 140 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ASF1BQ9NVP2 202 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 NME7Q9Y5B8 376 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 PCDHAC2Q9Y5I4 1007 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CORINQ9Y5Q5 1042 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 A0A0D9SG52 128 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 OR7A17O14581 309 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 EIF1AYO14602 144 aaKnown RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 SPDEFO95238 335 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 INHAP05111 366 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SYN1P17600 705 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 NFYAP23511 347 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 EIF1AXP47813 144 aaKnown RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 CDC42EP1Q00587 391 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ABHD18Q0P651 414 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TRAM2Q15035 370 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 PDIA6Q15084 440 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 FAM214AQ32MH5 1076 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 HECTD2Q5U5R9 776 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CD276Q5ZPR3 534 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 VN1R5Q7Z5H4 357 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TMEM200AQ86VY9 491 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SLC35F3Q8IY50 421 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 PXT1Q8NFP0 134 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SMAP2Q8WU79 429 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 RAD51AP1Q96B01 352 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ELP4Q96EB1 424 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 P2RY11Q96G91 374 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 USB1Q9BQ65 265 aaKnown RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 OCSTAMPQ9BR26 566 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TGIF2Q9GZN2 237 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 BTBD1Q9H0C5 482 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TEX10Q9NXF1 929 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 TRPC4Q9UBN4 977 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ASF1AQ9Y294 204 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 METTL15A6NJ78 407 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 FGF10O15520 208 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 MOCS2O96007 188 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 ALDOBP05062 364 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 FGRP09769 529 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 GSTM3P21266 225 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 NUDT6P53370 316 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 EEF1A1P68104 462 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 CAP1Q01518 475 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 MLLT1Q03111 559 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 EEF1A2Q05639 463 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 TAF13Q15543 124 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ZACNQ401N2 412 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 GCNT6Q5T4J0 391 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 EEF1A1P5Q5VTE0 462 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 IER5Q5VY09 327 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 SERPINA13PQ6UXR4 307 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 NPAS4Q8IUM7 802 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 FOXRED2Q8IWF2 684 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ZC3H3Q8IXZ2 948 aaKnown RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 LGI4Q8N135 537 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ATP6V1C2Q8NEY4 427 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 MFSD8Q8NHS3 518 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 C1orf216Q8TAB5 229 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 TM9SF4Q92544 642 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 NELL2Q99435 816 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 SLC28A3Q9HAS3 691 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 CNTN3Q9P232 1028 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ASH2LQ9UBL3 628 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 PCDHGA8Q9Y5G5 932 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 ARF4P18085 180 aaPredicted RBP4.88□□□□□ -1.63
SKP1-202ENST00000353411 MAN2A2P49641 1150 aa4.88□□□□□ -1.63
SKP1-202ENST00000353411 CPTPQ5TA50 214 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms