RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 NIPAL4Q0D2K0 466 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 FOXL1Q12952 345 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 NSDHLQ15738 373 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 NRF1Q16656 503 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 PRTGQ2VWP7 1150 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 P3H1Q32P28 736 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 RESP18Q5W5W9 173 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 ZNF550Q7Z398 422 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 PM20D2Q8IYS1 436 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 NEIL3Q8TAT5 605 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 MSI2Q96DH6 328 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 FAM111AQ96PZ2 611 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 SRPK1Q96SB4 655 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 MANSC1Q9H8J5 431 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 RBM22Q9NW64 420 aaKnown RBP eCLIP8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 HPF1Q9NWY4 346 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 CWC15Q9P013 229 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 AMACRQ9UHK6 382 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 PTGDR2Q9Y5Y4 395 aa8.23□□□□□ -1.09
UBE2D3-205ENST00000350435 C15orf38-AP3S2A0A0A6YYH1 394 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 OR2W5A6NFC9 320 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 FOXN3O00409 490 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 AURKAO14965 403 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 FOXS1O43638 330 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 SOD3P08294 240 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 PNMA6AP0CW24 399 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 TPBGLP0DKB5 382 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 RALBP11234 206 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 TNNT1P13805 278 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 H2AFXP16104 143 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 CNR1P21554 472 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 AVPR1BP47901 424 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 HCAR3P49019 387 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 PRLHRP49683 370 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 CCR8P51685 355 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 ZNF135P52742 658 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 LRRC63Q05C16 580 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 PCDH1Q08174 1060 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 FAPQ12884 760 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 FOXF2Q12947 444 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 RPA4Q13156 261 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 ABRAXAS2Q15018 415 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 PDK1Q15118 436 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 ERMARDQ5T6L9 678 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 LRRC8BQ6P9F7 803 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 FAM47EQ6ZV65 393 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 TAX1BP1Q86VP1 789 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 GPALPP1Q8IXQ4 340 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 ARMC10Q8N2F6 343 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 C2orf73Q8N5S3 287 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 ASB11Q8WXH4 323 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 FBXW5Q969U6 566 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 DCUN1D1Q96GG9 259 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 TEKT5Q96M29 485 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 CEP63Q96MT8 703 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 CRACR2AQ9BSW2 395 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 RASSF4Q9H2L5 321 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 ZWILCHQ9H900 591 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 FN3KRPQ9HA64 309 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 RUVBL1Q9Y265 456 aaKnown RBP8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 MAGED1Q9Y5V3 778 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 SCN3AQ9NY46 2000 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 RYR1P21817 5038 aa8.22□□□□□ -1.09
UBE2D3-205ENST00000350435 MED12LQ86YW9 2145 aa8.21□□□□□ -1.09
UBE2D3-205ENST00000350435 CLGNO14967 610 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 YEATS4O95619 227 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 ZSCAN22P10073 491 aaPredicted RBP8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 SLC9A1P19634 815 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 MMP8P22894 467 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 SERPINB6P35237 376 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 HMGCLP35914 325 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 CD79BP40259 229 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 XCR1P46094 333 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 PCYT1AP49585 367 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 PMS1P54277 932 aaKnown RBP8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 MPP1Q00013 466 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 LGALS3BPQ08380 585 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 SCGB2A2Q13296 93 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 TYSND1Q2T9J0 566 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 IL20RBQ6UXL0 311 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 RBM43Q6ZSC3 357 aaKnown RBP8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 RNF44Q7L0R7 432 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 C1QL4Q86Z23 238 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 C9orf106Q8NAJ2 232 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 OR5K2Q8NHB8 316 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 FAM71BQ8TC56 605 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 PROX1Q92786 737 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 ANKRD9Q96BM1 317 aaPredicted RBP8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 ZFP3Q96NJ6 502 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 SNRNP25Q9BV90 132 aaKnown RBP8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 VPS16Q9H269 839 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 SLC6A15Q9H2J7 730 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 ALG2Q9H553 416 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 VPS37BQ9H9H4 285 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 CALHM2Q9HA72 323 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 SMOXQ9NWM0 555 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 PACSIN3Q9UKS6 424 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 CAMK2AQ9UQM7 478 aa8.21□□□□□ -1.1
UBE2D3-205ENST00000350435 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms