RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PCM1Q15154 2024 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 KCNE1BA0A087WTH5 132 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 PRPS2P11908 318 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 FCGR1AP12314 374 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 NPPBP16860 134 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 ITGB7P26010 798 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 ALDH4A1P30038 563 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 CHI3L1P36222 383 aaPredicted RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 BCAP31P51572 246 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 CLDN2P57739 230 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 DLX2Q07687 328 aaPredicted RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 SGCGQ13326 291 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 WSCD2Q2TBF2 565 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 TMEM179BQ7Z7N9 219 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 ZDHHC21Q8IVQ6 265 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 GLB1L3Q8NCI6 653 aaPredicted RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 OR9A1PQ8NGU1 263 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 TSPEARQ8WU66 669 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 UBTD2Q8WUN7 234 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 NPLQ9BXD5 320 aaPredicted RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 ABCG4Q9H172 646 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 TOR3AQ9H497 397 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 TPT1P8Q9HAU6 139 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 SERHLQ9NQF3 203 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 FZD4Q9ULV1 537 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 TMEM247A6NEH6 219 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 ARNTLO00327 626 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 ACOX3O15254 700 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 PSIP1O75475 530 aaKnown RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 PFKLP17858 780 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 OPRD1P41143 372 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 PRIM2P49643 509 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 HIST2H2ACQ16777 129 aaPredicted RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 RGS21Q2M5E4 152 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 ZNF829Q3KNS6 432 aaPredicted RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 COQ5Q5HYK3 327 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 HIST2H2AA3Q6FI13 130 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 PIWIL3Q7Z3Z3 882 aaKnown RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 C11orf74Q86VG3 221 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 AADATQ8N5Z0 425 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 HM13Q8TCT9 377 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 WFIKKN2Q8TEU8 576 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 SH3GL1Q99961 368 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 ANKRD60Q9BZ19 345 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 RASSF1Q9NS23 344 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 PADI4Q9UM07 663 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 A8MU76 341 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 DLGAP1O14490 977 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 ETFAP13804 333 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 POU2F1P14859 743 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 CCNA2P20248 432 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 PRKAG1P54619 331 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 RAD23AP54725 363 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 ARSFP54793 590 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 TAP2Q03519 686 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 ATP6AP1Q15904 470 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 MEP1AQ16819 746 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 OLIG3Q7RTU3 272 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 COMMD6Q7Z4G1 85 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 TMEM126BQ8IUX1 230 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 TBC1D15Q8TC07 691 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 EXOSC8Q96B26 276 aaKnown RBP13.36□□□□□ -0.27
TRIM4-201ENST00000349062 COQ10AQ96MF6 247 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 FAM83CQ9BQN1 747 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 MKRN2Q9H000 416 aaKnown RBP13.36□□□□□ -0.27
TRIM4-201ENST00000349062 NTN4Q9HB63 628 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 ABCG2Q9UNQ0 655 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 PIPSLA2A3N6 862 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 ADAM23O75077 832 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 AP2A2O94973 939 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 SLC35G4P0C7Q5 338 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 PRPS1L1P21108 318 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 IL5RAQ01344 420 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 CCDC92Q53HC0 331 aaPredicted RBP13.36□□□□□ -0.27
TRIM4-201ENST00000349062 C6orf183Q5T699 404 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 ABRAXAS1Q6UWZ7 409 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 KIAA1324Q6UXG2 1013 aaKnown RBP13.36□□□□□ -0.27
TRIM4-201ENST00000349062 ARMCX6Q7L4S7 300 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 DSG4Q86SJ6 1040 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 HORMAD1Q86X24 394 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 SLC7A5P1Q8MH63 180 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 PGBD3Q8N328 593 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 CSGALNACT1Q8TDX6 532 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 HPS1Q92902 700 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 GLMNQ92990 594 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 MARK1Q9P0L2 795 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 KIF17Q9P2E2 1029 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 RUVBL1Q9Y265 456 aaKnown RBP13.36□□□□□ -0.27
TRIM4-201ENST00000349062 CNTRLQ7Z7A1 2325 aa13.36□□□□□ -0.27
TRIM4-201ENST00000349062 OR1F1O43749 312 aa13.35□□□□□ -0.27
TRIM4-201ENST00000349062 BMP10O95393 424 aa13.35□□□□□ -0.27
TRIM4-201ENST00000349062 MAGP20916 626 aa13.35□□□□□ -0.27
TRIM4-201ENST00000349062 MATN1P21941 496 aa13.35□□□□□ -0.27
TRIM4-201ENST00000349062 HSPB3Q12988 150 aa13.35□□□□□ -0.27
TRIM4-201ENST00000349062 ZNF385BQ569K4 471 aa13.35□□□□□ -0.27
TRIM4-201ENST00000349062 PRAMEF14Q5SWL7 426 aa13.35□□□□□ -0.27
TRIM4-201ENST00000349062 C1QTNF12Q5T7M4 302 aa13.35□□□□□ -0.27
TRIM4-201ENST00000349062 PRAMEF13Q5VWM6 474 aa13.35□□□□□ -0.27
TRIM4-201ENST00000349062 TNFAIP8L2Q6P589 184 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms