RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CACNA2D3Q8IZS8 1091 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 NT5CQ8TCD5 201 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 SLC13A3Q8WWT9 602 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 C11orf24Q96F05 449 aaPredicted RBP25.84■■□□□ 1.73
SSBP4-202ENST00000348495 LRTM1Q9HBL6 345 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 C1orf109Q9NX04 203 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 TOR4AQ9NXH8 423 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 COL27A1Q8IZC6 1860 aaPredicted RBP25.84■■□□□ 1.73
SSBP4-202ENST00000348495 LRIT2A6NDA9 550 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 E9PBE3 544 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 NDUFS4O43181 175 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 KLHL41O60662 606 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 MLLT3P42568 568 aaPredicted RBP25.83■■□□□ 1.73
SSBP4-202ENST00000348495 SEPHS1P49903 392 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 SPIDRQ14159 915 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 SMU1Q2TAY7 513 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 GALNTL6Q49A17 601 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 ZFAND4Q86XD8 727 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 APIPQ96GX9 242 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 METTL2AQ96IZ6 378 aaKnown RBP25.83■■□□□ 1.73
SSBP4-202ENST00000348495 ZNF285Q96NJ3 590 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 SLC6A16Q9GZN6 736 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 NMRK1Q9NWW6 199 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 HEY2Q9UBP5 337 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 GVINP1Q7Z2Y8 2422 aa25.83■■□□□ 1.73
SSBP4-202ENST00000348495 A8MU76 341 aa25.83■■□□□ 1.72
SSBP4-202ENST00000348495 P2RX6O15547 441 aa25.83■■□□□ 1.72
SSBP4-202ENST00000348495 SH3BGRLO75368 114 aa25.83■■□□□ 1.72
SSBP4-202ENST00000348495 STATHP02808 62 aa25.83■■□□□ 1.72
SSBP4-202ENST00000348495 HNRNPH1P31943 449 aaKnown RBP25.83■■□□□ 1.72
SSBP4-202ENST00000348495 DEFB110Q30KQ9 67 aa25.83■■□□□ 1.72
SSBP4-202ENST00000348495 RFTN2Q52LD8 501 aaPredicted RBP25.83■■□□□ 1.72
SSBP4-202ENST00000348495 CHTF18Q8WVB6 975 aa25.83■■□□□ 1.72
SSBP4-202ENST00000348495 RERGQ96A58 199 aaPredicted RBP25.83■■□□□ 1.72
SSBP4-202ENST00000348495 CCDC74BQ96LY2 380 aa25.83■■□□□ 1.72
SSBP4-202ENST00000348495 MACROD1Q9BQ69 325 aa25.83■■□□□ 1.72
SSBP4-202ENST00000348495 PLCL2Q9UPR0 1127 aa25.83■■□□□ 1.72
SSBP4-202ENST00000348495 ADAMTS20P59510 1910 aa25.82■■□□□ 1.72
SSBP4-202ENST00000348495 SRPX2O60687 465 aaPredicted RBP25.82■■□□□ 1.72
SSBP4-202ENST00000348495 RFPL3O75679 317 aa25.82■■□□□ 1.72
SSBP4-202ENST00000348495 SEMA3DO95025 777 aa25.82■■□□□ 1.72
SSBP4-202ENST00000348495 ALDOCP09972 364 aaKnown RBP25.82■■□□□ 1.72
SSBP4-202ENST00000348495 MSL3P1P0C860 447 aa25.82■■□□□ 1.72
SSBP4-202ENST00000348495 ERVK-8P63133 956 aa25.82■■□□□ 1.72
SSBP4-202ENST00000348495 ZFP36L1Q07352 338 aaKnown RBP25.82■■□□□ 1.72
SSBP4-202ENST00000348495 SPDYAQ5MJ70 313 aa25.82■■□□□ 1.72
SSBP4-202ENST00000348495 TMEM198Q66K66 360 aa25.82■■□□□ 1.72
SSBP4-202ENST00000348495 F2RL3Q96RI0 385 aa25.82■■□□□ 1.72
SSBP4-202ENST00000348495 MRPL1Q9BYD6 325 aaKnown RBP25.82■■□□□ 1.72
SSBP4-202ENST00000348495 RAPGEFL1Q9UHV5 662 aa25.82■■□□□ 1.72
SSBP4-202ENST00000348495 PCDHGA1Q9Y5H4 931 aa25.82■■□□□ 1.72
SSBP4-202ENST00000348495 MAP3K7O43318 606 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 SEC22BO75396 215 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 SERPIND1P05546 499 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 PDX1P52945 283 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 E2F1Q01094 437 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 EMX2Q04743 252 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 TRIP6Q15654 476 aaKnown RBP25.81■■□□□ 1.72
SSBP4-202ENST00000348495 TMEM35AQ53FP2 167 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 CAMKVQ8NCB2 501 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 FCRL1Q96LA6 429 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 ENAMQ9NRM1 1142 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 SIRT5Q9NXA8 310 aa25.81■■□□□ 1.72
SSBP4-202ENST00000348495 FAM186AA6NE01 2351 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 CTSBP07858 339 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 SLC35G6P0C7Q6 338 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 ARL4DP49703 201 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 KCNAB1Q14722 419 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 MANEAQ5SRI9 462 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 UBE3DQ7Z6J8 389 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 METTL4Q8N3J2 472 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 MS4A6EQ96DS6 147 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 ZNF717Q9BY31 904 aaPredicted RBP25.8■■□□□ 1.72
SSBP4-202ENST00000348495 REXO4Q9GZR2 422 aaKnown RBP25.8■■□□□ 1.72
SSBP4-202ENST00000348495 KLHL31Q9H511 634 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 PRM3Q9NNZ6 103 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 TRIM33Q9UPN9 1127 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 PCNX2A6NKB5 2137 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 SAP18O00422 153 aaKnown RBP25.8■■□□□ 1.72
SSBP4-202ENST00000348495 VSX2P58304 361 aaPredicted RBP25.8■■□□□ 1.72
SSBP4-202ENST00000348495 RPL38P63173 70 aaKnown RBP25.8■■□□□ 1.72
SSBP4-202ENST00000348495 RGS1Q08116 209 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 TRA2AQ13595 282 aaKnown RBP eCLIP25.8■■□□□ 1.72
SSBP4-202ENST00000348495 SPIN4Q56A73 249 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 SPATA19Q7Z5L4 167 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 B3GNT8Q7Z7M8 397 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 CSNK1A1LQ8N752 337 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 FNDC5Q8NAU1 212 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 ZNF385DQ9H6B1 395 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 ASIC5Q9NY37 505 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 TMED5Q9Y3A6 229 aa25.8■■□□□ 1.72
SSBP4-202ENST00000348495 PLPP1O14494 284 aa25.79■■□□□ 1.72
SSBP4-202ENST00000348495 UBDO15205 165 aa25.79■■□□□ 1.72
SSBP4-202ENST00000348495 HKDC1Q2TB90 917 aa25.79■■□□□ 1.72
SSBP4-202ENST00000348495 GALNT18Q6P9A2 607 aa25.79■■□□□ 1.72
SSBP4-202ENST00000348495 ARHGEF39Q8N4T4 335 aa25.79■■□□□ 1.72
SSBP4-202ENST00000348495 C1orf52Q8N6N3 182 aaKnown RBP25.79■■□□□ 1.72
SSBP4-202ENST00000348495 KCT2Q8NC54 265 aa25.79■■□□□ 1.72
SSBP4-202ENST00000348495 RCBTB1Q8NDN9 531 aa25.79■■□□□ 1.72
SSBP4-202ENST00000348495 DEFB124Q8NES8 71 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms