RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 TRIM2Q9C040 744 aa18.01■□□□□ 0.47
UBE3C-201ENST00000348165 ACTR3BQ9P1U1 418 aa18.01■□□□□ 0.47
UBE3C-201ENST00000348165 PFDN2Q9UHV9 154 aa18.01■□□□□ 0.47
UBE3C-201ENST00000348165 HMGN1P05114 100 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 CD1DP15813 335 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 TGFBR2P37173 567 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 NUDT6P53370 316 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 PTGR1Q14914 329 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 OR8H1Q8NGG4 311 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 UFD1Q92890 307 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 BIRC7Q96CA5 298 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 OR8D2Q9GZM6 311 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 POPDC3Q9HBV1 291 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 FARSBQ9NSD9 589 aaKnown RBP18■□□□□ 0.47
UBE3C-201ENST00000348165 BHMG1C9JSJ3 638 aaPredicted RBP18■□□□□ 0.47
UBE3C-201ENST00000348165 LDOC1O95751 146 aaPredicted RBP18■□□□□ 0.47
UBE3C-201ENST00000348165 STARP49675 285 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 ZNF763Q0D2J5 394 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 UBE2J2Q8N2K1 259 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 OR2AJ1Q8NGZ0 328 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 LRIG1Q96JA1 1093 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 IL17FQ96PD4 163 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 PKP2Q99959 881 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 C1QTNF1Q9BXJ1 281 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 IL21RQ9HBE5 538 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 SERINC1Q9NRX5 453 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 CENPMQ9NSP4 180 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 C10orf71Q711Q0 1435 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 ANXA2P2A6NMY6 339 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 SCDO00767 359 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 ANXA2P07355 339 aaKnown RBP18■□□□□ 0.47
UBE3C-201ENST00000348165 PRKACGP22612 351 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 DNAJB13P59910 316 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 CAMK1Q14012 370 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 CEP97Q8IW35 865 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 METTL27Q8N6F8 245 aaPredicted RBP18■□□□□ 0.47
UBE3C-201ENST00000348165 PJA1Q8NG27 643 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 SAMD11Q96NU1 681 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 LDHAL6BQ9BYZ2 381 aaPredicted RBP18■□□□□ 0.47
UBE3C-201ENST00000348165 TCF7L1Q9HCS4 588 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 ARF5P84085 180 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 PUS10Q3MIT2 529 aaKnown RBP18■□□□□ 0.47
UBE3C-201ENST00000348165 CLLU1OSQ5K130 101 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 BICRALQ6AI39 1079 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 TMEM135Q86UB9 458 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 RNF130Q86XS8 419 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 CHERPQ8IWX8 916 aaKnown RBP18■□□□□ 0.47
UBE3C-201ENST00000348165 HSH2DQ96JZ2 352 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 PHF12Q96QT6 1004 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 STRA6Q9BX79 667 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 MALT1Q9UDY8 824 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 SERTAD3Q9UJW9 196 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 IRS2Q9Y4H2 1338 aa18■□□□□ 0.47
UBE3C-201ENST00000348165 LAPTM4AQ15012 233 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 CYP27C1Q4G0S4 372 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 WDR45BQ5MNZ6 344 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 PRPF38BQ5VTL8 546 aaKnown RBP17.99■□□□□ 0.47
UBE3C-201ENST00000348165 NCCRP1Q6ZVX7 275 aaPredicted RBP17.99■□□□□ 0.47
UBE3C-201ENST00000348165 ZDHHC14Q8IZN3 488 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 TRAM1L1Q8N609 369 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 PHOSPHO1Q8TCT1 267 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 AURKBQ96GD4 344 aaPredicted RBP17.99■□□□□ 0.47
UBE3C-201ENST00000348165 IGLON5A6NGN9 336 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 ZNF99A8MXY4 864 aaPredicted RBP17.99■□□□□ 0.47
UBE3C-201ENST00000348165 COQ9O75208 318 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 GSRP00390 522 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 ACRV1P26436 265 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 ZFP3Q96NJ6 502 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 CD70P32970 193 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 TXNL4AP83876 142 aaKnown RBP17.99■□□□□ 0.47
UBE3C-201ENST00000348165 RAB33AQ14088 237 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 ZNF542PQ5EBM4 170 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 KBTBD6Q86V97 674 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 FATE1Q969F0 183 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 RAB7BQ96AH8 199 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 COQ8BQ96D53 544 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 ZNF382Q96SR6 550 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 FAM83CQ9BQN1 747 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 PCDHGA10Q9Y5H3 936 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 RPLP0P05388 317 aaKnown RBP17.99■□□□□ 0.47
UBE3C-201ENST00000348165 RBBP4Q09028 425 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 ZNF252P-AS1Q0IIN9 211 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 NPTX1Q15818 432 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 TECRLQ5HYJ1 363 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 RBM12BQ8IXT5 1001 aaKnown RBP17.99■□□□□ 0.47
UBE3C-201ENST00000348165 GPR174Q9BXC1 333 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 CD320Q9NPF0 282 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 KLRF1Q9NZS2 232 aa17.99■□□□□ 0.47
UBE3C-201ENST00000348165 FAM170BA6NMN3 283 aa17.98■□□□□ 0.47
UBE3C-201ENST00000348165 ZNF726A6NNF4 738 aa17.98■□□□□ 0.47
UBE3C-201ENST00000348165 E7ESA3 106 aa17.98■□□□□ 0.47
UBE3C-201ENST00000348165 TLR4O00206 839 aa17.98■□□□□ 0.47
UBE3C-201ENST00000348165 SLC35E2BP0CK96 405 aa17.98■□□□□ 0.47
UBE3C-201ENST00000348165 PTNP21246 168 aa17.98■□□□□ 0.47
UBE3C-201ENST00000348165 SHMT2P34897 504 aa17.98■□□□□ 0.47
UBE3C-201ENST00000348165 PHC1P78364 1004 aa17.98■□□□□ 0.47
UBE3C-201ENST00000348165 ZNF267Q14586 743 aaPredicted RBP17.98■□□□□ 0.47
UBE3C-201ENST00000348165 FBXO46Q6PJ61 603 aaPredicted RBP17.98■□□□□ 0.47
UBE3C-201ENST00000348165 OR56A1Q8NGH5 318 aa17.98■□□□□ 0.47
UBE3C-201ENST00000348165 PYURFQ96I23 114 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms