RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 FAM171BQ6P995 826 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 Q6ZVL8 140 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 TICAM1Q8IUC6 712 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 IQCF2Q8IXL9 164 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 OR51G2Q8NGK0 314 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 ZNF431Q8TF32 576 aaPredicted RBP7.55□□□□□ -1.2
KPNA1-201ENST00000344337 TFAP2CQ92754 450 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 CLP1Q92989 425 aaKnown RBP7.55□□□□□ -1.2
KPNA1-201ENST00000344337 BCL7BQ9BQE9 202 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 FARSAQ9Y285 508 aaKnown RBP7.55□□□□□ -1.2
KPNA1-201ENST00000344337 A0A1W2PRB8 838 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 MYADML2A6NDP7 307 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 FAM183AA6NL82 134 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 BCKDHAP12694 445 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 NT5EP21589 574 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 ACLYP53396 1101 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 HSF2Q03933 536 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 IFI44LQ53G44 452 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 GTF2IRD2BQ6EKJ0 949 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 GTF2IRD2Q86UP8 949 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 OR4N5Q8IXE1 308 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 METTL27Q8N6F8 245 aaPredicted RBP7.55□□□□□ -1.2
KPNA1-201ENST00000344337 OR5M3Q8NGP4 307 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 UPF1Q92900 1129 aaKnown RBP eCLIP7.55□□□□□ -1.24e-9■■■■■ 35.6
KPNA1-201ENST00000344337 ACDQ96AP0 544 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 ALPK1Q96QP1 1244 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 ZCCHC3Q9NUD5 404 aaKnown RBP7.55□□□□□ -1.2
KPNA1-201ENST00000344337 CCDC59Q9P031 241 aaKnown RBP7.55□□□□□ -1.2
KPNA1-201ENST00000344337 MYOFQ9NZM1 2061 aa7.55□□□□□ -1.2
KPNA1-201ENST00000344337 KIAA1217Q5T5P2 1943 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 I6L893 689 aaPredicted RBP7.54□□□□□ -1.2
KPNA1-201ENST00000344337 TULP3O75386 442 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 AHCYP23526 432 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 OC90Q02509 493 aaPredicted RBP7.54□□□□□ -1.2
KPNA1-201ENST00000344337 TNFAIP8L3Q5GJ75 292 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 BCL2L15Q5TBC7 163 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 BLOC1S3Q6QNY0 202 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 PIK3R3Q92569 461 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 RIT1Q92963 219 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 LMLNQ96KR4 655 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 FOXN4Q96NZ1 517 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 TM9SF2Q99805 663 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 CD320Q9NPF0 282 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 VPS29Q9UBQ0 182 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 LOC102723532A0A0G2JNH3 316 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 KDM4FA0A1W2PPD8 638 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 ISPDA4D126 451 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 TNFSF12O43508 249 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 PRMT3O60678 531 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 DHFRP00374 187 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 PROS1P07225 676 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 EPHA2P29317 976 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 IDUAP35475 653 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 OMPP47874 163 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 BIKQ13323 160 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 PPP2R2DQ66LE6 453 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 LRRC66Q68CR7 880 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 SLC25A25Q6KCM7 469 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 CCDC116Q8IYX3 515 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 GPR151Q8TDV0 419 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
KPNA1-201ENST00000344337 KLHL6Q8WZ60 621 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 MYRFLQ96LU7 910 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 MGLLQ99685 303 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 DSN1Q9H410 356 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 PLSCR3Q9NRY6 295 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 H0YJX3 145 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 CXCL11O14625 94 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 ZNF26P17031 533 aaPredicted RBP7.54□□□□□ -1.2
KPNA1-201ENST00000344337 ACSL1P33121 698 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 SPAM1P38567 509 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 MLLT6P55198 1093 aaPredicted RBP7.54□□□□□ -1.2
KPNA1-201ENST00000344337 CACNG1Q06432 222 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 KIAA1614Q5VZ46 1190 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 PLEKHG7Q6ZR37 379 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 GPC2Q8N158 579 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 TBC1D15Q8TC07 691 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 AKAP1Q92667 903 aaKnown RBP eCLIP7.54□□□□□ -1.2
KPNA1-201ENST00000344337 MSLNLQ96KJ4 702 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 DHRS4Q9BTZ2 278 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 UCK2Q9BZX2 261 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 STOML2Q9UJZ1 356 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 OR10H1Q9Y4A9 318 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 CNR2P34972 360 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 TGFBR2P37173 567 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 RGRP47804 291 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 STC1P52823 247 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 ZNF791Q3KP31 576 aaPredicted RBP7.54□□□□□ -1.2
KPNA1-201ENST00000344337 SCGB2B2Q4G0G5 96 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 MFSD6LQ8IWD5 586 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 CHPFQ8IZ52 775 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 POMGNT2Q8NAT1 580 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 OR52L1Q8NGH7 329 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 TMEM125Q96AQ2 219 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 RIPOR3Q96MK2 946 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 RIOK2Q9BVS4 552 aaKnown RBP7.54□□□□□ -1.2
KPNA1-201ENST00000344337 EIF2B3Q9NR50 452 aaKnown RBP7.54□□□□□ -1.2
KPNA1-201ENST00000344337 GIT1Q9Y2X7 761 aa7.54□□□□□ -1.2
KPNA1-201ENST00000344337 OTOFQ9HC10 1997 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms