RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ABCG2Q9UNQ0 655 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 POFUT2Q9Y2G5 429 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 MRPS7Q9Y2R9 242 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 GLYATL1P3A0A0U1RQE8 302 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 PQLC2LA1A4F0 135 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 KPNA3O00505 521 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 WNT9AO14904 365 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 PER2O15055 1255 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 LZTS3O60299 673 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SNAPINO95295 136 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 COL6A1P12109 1028 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ERCC2P18074 760 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 FDXRP22570 491 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 PRKAR1BP31321 381 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 RPL34P49207 117 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SUOXP51687 545 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ACLYP53396 1101 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 PGGT1BP53609 377 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ATP12AP54707 1039 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SSTP61278 116 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 FKBP1AP62942 108 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ST3GAL4Q11206 333 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SCAPQ12770 1279 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 C1DQ13901 141 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 TAF12Q16514 161 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 KLHL22Q53GT1 634 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 FCRLBQ6BAA4 426 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 TMEM107Q6UX40 140 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 LIPIQ6XZB0 460 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 GPRIN3Q6ZVF9 776 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 FAM124AQ86V42 546 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 FAM9CQ8IZT9 166 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 PYROXD2Q8N2H3 581 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 CERS5Q8N5B7 392 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 OR6M1Q8NGM8 313 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 RIT1Q92963 219 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ULK4Q96C45 1275 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 MTERF3Q96E29 417 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 TRMT61AQ96FX7 289 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ITCHQ96J02 903 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SENP8Q96LD8 212 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 PPP3R2Q96LZ3 170 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 KCNA7Q96RP8 456 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 MED18Q9BUE0 208 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 CNPPD1Q9BV87 410 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ZNF436Q9C0F3 470 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ARHGAP39Q9C0H5 1083 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 RNF208Q9H0X6 261 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 TNKS2Q9H2K2 1166 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 HEXA-AS1Q9H8Q6 139 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ZNF302Q9NR11 478 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 RGS18Q9NS28 235 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SDHAF2Q9NX18 166 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 THUMPD1Q9NXG2 353 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 VAPAQ9P0L0 249 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 PRAMEF33A0A0G2JMD5 474 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 C7orf66A4D0T2 115 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 MFSD2BA6NFX1 497 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 A8MVJ9 347 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 SUPT3HB4E1H0 165 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 E9PAM4 449 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 M0R233 179 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 GABRDO14764 452 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 PCDH17O14917 1159 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 CHP2O43745 196 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 PRAMEF10O60809 474 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 EDN1P05305 212 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 STSP08842 583 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 WARSP23381 471 aaKnown RBP7.85□□□□□ -1.15
ATG4A-201ENST00000343524 RPS19P39019 145 aaKnown RBP7.85□□□□□ -1.15
ATG4A-201ENST00000343524 ZNF81P51508 661 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 HK3P52790 923 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 ATXN1P54253 815 aaKnown RBP7.85□□□□□ -1.15
ATG4A-201ENST00000343524 CDC42P60953 191 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 ABATP80404 500 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 HOXC5Q00444 222 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 FGFBP1Q14512 234 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 DMC1Q14565 340 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 STXBP2Q15833 593 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 ZNF284Q2VY69 593 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 TTLL9Q3SXZ7 439 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 SOWAHCQ53LP3 525 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-201ENST00000343524 CARD16Q5EG05 197 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 HACD4Q5VWC8 232 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 MEDAGQ5VYS4 303 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 CEP68Q76N32 757 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 KRT74Q7RTS7 529 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 UNC93AQ86WB7 457 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 CALHM3Q86XJ0 350 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 CILP2Q8IUL8 1156 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 CCDC71Q8IV32 467 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-201ENST00000343524 SLC34A3Q8N130 599 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 Q8N402 240 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 AGBL3Q8NEM8 1001 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 CREB3L4Q8TEY5 395 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 SLC9A6Q92581 669 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 UCN3Q969E3 161 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 OTULINQ96BN8 352 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 UPRTQ96BW1 309 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms