RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 OVCH2Q7RTZ1 564 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 BBS7Q8IWZ6 715 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 OR10Q1Q8NGQ4 319 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 SMG7Q92540 1137 aaKnown RBP17.89■□□□□ 0.45
SMPD1-201ENST00000342245 RIT1Q92963 219 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 P2RY13Q9BPV8 354 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 CD244Q9BZW8 370 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 WDCPQ9H6R7 721 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 ZFP64Q9NPA5 681 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 NDUFB11Q9NX14 153 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 FAM8A1Q9UBU6 413 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 BAIAP2Q9UQB8 552 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 ASB4Q9Y574 426 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 PCDHGA2Q9Y5H1 932 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 MAFKO60675 156 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 PRAMEF1O95521 474 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 ACVR1Q04771 509 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 RPA4Q13156 261 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 BCL7CQ8WUZ0 217 aaPredicted RBP17.89■□□□□ 0.45
SMPD1-201ENST00000342245 CCM2Q9BSQ5 444 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 COLEC11Q9BWP8 271 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 CLN6Q9NWW5 311 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 CPNE7Q9UBL6 633 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 CFAP20Q9Y6A4 193 aaKnown RBP17.89■□□□□ 0.45
SMPD1-201ENST00000342245 CDH10Q9Y6N8 788 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 H3BM21 787 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 I6L893 689 aaPredicted RBP17.88■□□□□ 0.45
SMPD1-201ENST00000342245 FZD9O00144 591 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 SLC28A1O00337 649 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 WNT10BO00744 389 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 SCAMP3O14828 347 aaKnown RBP17.88■□□□□ 0.45
SMPD1-201ENST00000342245 LDOC1O95751 146 aaPredicted RBP17.88■□□□□ 0.45
SMPD1-201ENST00000342245 C4BPBP20851 252 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 AGTR2P50052 363 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 CDC42P60953 191 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 FGFBP1Q14512 234 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 ATP6V1C2Q8NEY4 427 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 OR5T2Q8NGG2 359 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 SERPINB11Q96P15 392 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 GFM1Q96RP9 751 aaKnown RBP17.88■□□□□ 0.45
SMPD1-201ENST00000342245 DPYSL5Q9BPU6 564 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 MINDY3Q9H8M7 445 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 TMCC3Q9ULS5 477 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 TRAV19A0A0A6YYK7 116 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 PRSS44E7EML9 344 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 KPNA5O15131 536 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 YKT6O15498 198 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 RHOBTB1O94844 696 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 DIRAS1O95057 198 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 CDRT1O95170 752 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 CKMT1AP12532 417 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 STOMP27105 288 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 KDELR2P33947 212 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 RPL38P63173 70 aaKnown RBP17.88■□□□□ 0.45
SMPD1-201ENST00000342245 ALDH6A1Q02252 535 aaKnown RBP17.88■□□□□ 0.45
SMPD1-201ENST00000342245 MICAQ29983 383 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 PAN2Q504Q3 1202 aaKnown RBP17.88■□□□□ 0.45
SMPD1-201ENST00000342245 MEDAGQ5VYS4 303 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 ARMCX2Q7L311 632 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 ADGRD2Q7Z7M1 963 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 FAM83AQ86UY5 434 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 FAM9CQ8IZT9 166 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 HGDQ93099 445 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 UCN3Q969E3 161 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 HSH2DQ96JZ2 352 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 FAM129BQ96TA1 746 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 KCNJ15Q99712 375 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 SOSTQ9BQB4 213 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 RTP3Q9BQQ7 232 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 TMEM43Q9BTV4 400 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 DPCDQ9BVM2 203 aaPredicted RBP17.88■□□□□ 0.45
SMPD1-201ENST00000342245 DDIT4Q9NX09 232 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 PLEKHB1Q9UF11 243 aaPredicted RBP17.88■□□□□ 0.45
SMPD1-201ENST00000342245 GABRQQ9UN88 632 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 CSADQ9Y600 493 aa17.88■□□□□ 0.45
SMPD1-201ENST00000342245 A0A1W2PPL8 197 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 DHFRP00374 187 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 GTDC1Q4AE62 458 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 LIMS2Q7Z4I7 341 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 TIGD4Q8IY51 512 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 FOPNLQ96NB1 174 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 COPS3Q9UNS2 423 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 NUP205Q92621 2012 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 A0A1B0GVI7 797 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 ADAMDEC1O15204 470 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 SNAPC5O75971 98 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 SBF1O95248 1867 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 UBA1P22314 1058 aaKnown RBP17.87■□□□□ 0.45
SMPD1-201ENST00000342245 CXCR3P49682 368 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 ARSDP51689 593 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 HNRNPA0Q13151 305 aaKnown RBP17.87■□□□□ 0.45
SMPD1-201ENST00000342245 PTGR1Q14914 329 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 ZNF284Q2VY69 593 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 IQCCQ4KMZ1 466 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 FKBP1CQ5VVH2 108 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 PAQR3Q6TCH7 311 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 ARHGAP12Q8IWW6 846 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 OR6M1Q8NGM8 313 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 COPS5Q92905 334 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 MND1Q9BWT6 205 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms