RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CYTH2Q99418 400 aa10.24□□□□□ -0.77
ATXN3-201ENST00000340660 CNPY3Q9BT09 278 aa10.24□□□□□ -0.77
ATXN3-201ENST00000340660 UBE2TQ9NPD8 197 aaPredicted RBP10.24□□□□□ -0.77
ATXN3-201ENST00000340660 MKKSQ9NPJ1 570 aaPredicted RBP10.24□□□□□ -0.77
ATXN3-201ENST00000340660 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.24□□□□□ -0.77
ATXN3-201ENST00000340660 MED29Q9NX70 200 aa10.24□□□□□ -0.77
ATXN3-201ENST00000340660 FZD10Q9ULW2 581 aa10.24□□□□□ -0.77
ATXN3-201ENST00000340660 DRG1Q9Y295 367 aaKnown RBP10.24□□□□□ -0.77
ATXN3-201ENST00000340660 PCDHGB3Q9Y5G1 929 aa10.24□□□□□ -0.77
ATXN3-201ENST00000340660 OR2W5A6NFC9 320 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 C2CD4BA6NLJ0 364 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 FOXN3O00409 490 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-201ENST00000340660 IL18BPO95998 194 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 TPBGLP0DKB5 382 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 USP8P40818 1118 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 SLC26A3P40879 764 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 MMP13P45452 471 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 MEI1Q5TIA1 1274 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 CYP4Z2PQ8N1L4 340 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 FAM109AQ8N4B1 249 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 ELP5Q8TE02 316 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 MRPL24Q96A35 216 aaKnown RBP10.23□□□□□ -0.77
ATXN3-201ENST00000340660 MSI2Q96DH6 328 aaKnown RBP10.23□□□□□ -0.77
ATXN3-201ENST00000340660 RAB11FIP5Q9BXF6 653 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 LDAHQ9H6V9 325 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 PCDH9Q9HC56 1237 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 NT5MQ9NPB1 228 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 NLRC4Q9NPP4 1024 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 SHOC2Q9UQ13 582 aa10.23□□□□□ -0.77
ATXN3-201ENST00000340660 ATP6AP2A0A1C7CYW4 349 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 ANKRD33BA6NCL7 494 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 LRRC10BA6NIK2 292 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 SSX4O60224 188 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 ERN1O75460 977 aaKnown RBP10.22□□□□□ -0.77
ATXN3-201ENST00000340660 ATP6AP2O75787 350 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 TUBB4AP04350 444 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 DPP4P27487 766 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 CDH5P33151 784 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-201ENST00000340660 GZMKP49863 264 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 RPL26P61254 145 aaKnown RBP10.22□□□□□ -0.77
ATXN3-201ENST00000340660 LCE1DQ5T752 114 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 FRMPD2BQ6IN97 320 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 GJB7Q6PEY0 223 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 PAPD4Q6PIY7 484 aaKnown RBP10.22□□□□□ -0.77
ATXN3-201ENST00000340660 DET1Q7L5Y6 550 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 TMC3Q7Z5M5 1100 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 PEG10Q86TG7 708 aaKnown RBP10.22□□□□□ -0.77
ATXN3-201ENST00000340660 CAND1Q86VP6 1230 aaKnown RBP10.22□□□□□ -0.77
ATXN3-201ENST00000340660 MRPL41Q8IXM3 137 aaKnown RBP10.22□□□□□ -0.77
ATXN3-201ENST00000340660 CFAP206Q8IYR0 622 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 ZNF653Q96CK0 615 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 RBMXL1Q96E39 390 aaKnown RBP10.22□□□□□ -0.77
ATXN3-201ENST00000340660 USP28Q96RU2 1077 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 CCM2Q9BSQ5 444 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 MED18Q9BUE0 208 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 MVB12BQ9H7P6 319 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 ARMCX3Q9UH62 379 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-201ENST00000340660 PCDHA7Q9UN72 937 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 RPL26L1Q9UNX3 145 aaKnown RBP10.22□□□□□ -0.77
ATXN3-201ENST00000340660 LIPT1Q9Y234 373 aa10.22□□□□□ -0.77
ATXN3-201ENST00000340660 LOC105369274A0A096LPK9 316 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 TRGV5A0A0B4J1U4 118 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 LOC102723532A0A0G2JNH3 316 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 FEZF1A0PJY2 475 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 DBX1A6NMT0 343 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 ISM1B1AKI9 464 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 MAFKO60675 156 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 CTSVO60911 334 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 CBX7O95931 251 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 PIRTP0C851 137 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 ERCC2P18074 760 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 CCKARP32238 428 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 SHMT2P34897 504 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 SRP14P37108 136 aaKnown RBP10.21□□□□□ -0.77
ATXN3-201ENST00000340660 FAM27E3Q08E93 113 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 FOXF2Q12947 444 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 BOP1Q14137 746 aaKnown RBP10.21□□□□□ -0.77
ATXN3-201ENST00000340660 MUM1Q2TAK8 710 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 SH2D5Q6ZV89 423 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 THAP5Q7Z6K1 395 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 OR4N4Q8N0Y3 316 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 BBS5Q8N3I7 341 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 OR52A5Q9H2C5 316 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 MANSC1Q9H8J5 431 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 ARL15Q9NXU5 204 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 C19orf25Q9UFG5 118 aaPredicted RBP10.21□□□□□ -0.77
ATXN3-201ENST00000340660 PCDHA3Q9Y5H8 950 aa10.21□□□□□ -0.77
ATXN3-201ENST00000340660 ANKRD66B4E2M5 251 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 G3V3Y1 287 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 HCN1O60741 890 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 CYP11B1P15538 503 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 HTR7P34969 479 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 SLC26A5P58743 744 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 MAT1AQ00266 395 aaKnown RBP10.2□□□□□ -0.78
ATXN3-201ENST00000340660 USP10Q14694 798 aaKnown RBP10.2□□□□□ -0.78
ATXN3-201ENST00000340660 NDUFAF5Q5TEU4 345 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 MARC1Q5VT66 337 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 NSUN5P2Q63ZY6 315 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 SCYL2Q6P3W7 929 aa10.2□□□□□ -0.78
ATXN3-201ENST00000340660 ZNF550Q7Z398 422 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms