RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 XPR1Q9UBH6 696 aa18.22■□□□□ 0.51
SYNE4-202ENST00000340477 PIEZO2Q9H5I5 2752 aa18.22■□□□□ 0.51
SYNE4-202ENST00000340477 NUP210LQ5VU65 1888 aa18.22■□□□□ 0.51
SYNE4-202ENST00000340477 ATMQ13315 3056 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 ANKDD1BA6NHY2 528 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 VSTM2BA6NLU5 285 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 MAP2K7O14733 419 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 FOXS1O43638 330 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 UMODP07911 640 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 MMP11P24347 488 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 STXBP1P61764 594 aaKnown RBP18.21■□□□□ 0.51
SYNE4-202ENST00000340477 TIFABQ6ZNK6 161 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.21■□□□□ 0.51
SYNE4-202ENST00000340477 PRSS58Q8IYP2 241 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 PLD6Q8N2A8 252 aaKnown RBP18.21■□□□□ 0.51
SYNE4-202ENST00000340477 ARHGEF39Q8N4T4 335 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 EXD3Q8N9H8 876 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 KCT2Q8NC54 265 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 MRPL57Q9BQC6 102 aaKnown RBP18.21■□□□□ 0.51
SYNE4-202ENST00000340477 NT5DC2Q9H857 520 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 C3orf18Q9UK00 162 aa18.21■□□□□ 0.51
SYNE4-202ENST00000340477 IGLV3-12A0A075B6K2 115 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 KLHL18O94889 574 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 SERPINA6P08185 405 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 ALOX12P18054 663 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 GCAP28676 217 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 AGTR2P50052 363 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 VSNL1P62760 191 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 KLC1Q07866 573 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 CHIT1Q13231 466 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 NAA30Q147X3 362 aaPredicted RBP18.2■□□□□ 0.5
SYNE4-202ENST00000340477 TBCCQ15814 346 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 MFSD4BQ5TF39 518 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 CPZQ66K79 652 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 METTL2BQ6P1Q9 378 aaKnown RBP18.2■□□□□ 0.5
SYNE4-202ENST00000340477 PPP1R32Q7Z5V6 425 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 TEX9Q8N6V9 391 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 AMER3Q8N944 861 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 ANKRD53Q8N9V6 530 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 ACMSDQ8TDX5 336 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 GPR78Q96P69 363 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 SLC25A18Q9H1K4 315 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 MRPL46Q9H2W6 279 aaKnown RBP18.2■□□□□ 0.5
SYNE4-202ENST00000340477 EPB41L4BQ9H329 900 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 P4HTMQ9NXG6 502 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 TBK1Q9UHD2 729 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 MRPS2Q9Y399 296 aaKnown RBP18.2■□□□□ 0.5
SYNE4-202ENST00000340477 NAALAD2Q9Y3Q0 740 aa18.2■□□□□ 0.5
SYNE4-202ENST00000340477 A0A088AWK7 358 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 SGK494L7N484 410 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 AGPSO00116 658 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 PCDH17O14917 1159 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 KLK8O60259 260 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 KLHL41O60662 606 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 HEXBP07686 556 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 ZNF888P0CJ79 500 aaPredicted RBP18.19■□□□□ 0.5
SYNE4-202ENST00000340477 MTHFD2P13995 350 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 ZNF10P21506 573 aaPredicted RBP18.19■□□□□ 0.5
SYNE4-202ENST00000340477 ARL1P40616 181 aaPredicted RBP18.19■□□□□ 0.5
SYNE4-202ENST00000340477 C19orf57Q0VDD7 668 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 CHAF1BQ13112 559 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 DOC2AQ14183 400 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 VWA2Q5GFL6 755 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 TOR1AIP1Q5JTV8 583 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 WDR93Q6P2C0 686 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 EMBQ6PCB8 327 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 MYLK4Q86YV6 388 aaPredicted RBP18.19■□□□□ 0.5
SYNE4-202ENST00000340477 PTGR2Q8N8N7 351 aaPredicted RBP18.19■□□□□ 0.5
SYNE4-202ENST00000340477 WDR34Q96EX3 536 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 FAR2Q96K12 515 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 TGIF2Q9GZN2 237 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 ZNF358Q9NW07 568 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 HCN3Q9P1Z3 774 aa18.19■□□□□ 0.5
SYNE4-202ENST00000340477 ATRXP46100 2492 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 SCN3AQ9NY46 2000 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 FFAR3O14843 346 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 GPR42O15529 346 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 RDH16O75452 317 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 CLEC3AO75596 197 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 ACPPP15309 386 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 KRT15P19012 456 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 TAC1P20366 129 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 SERPINB1P30740 379 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 HNF4AP41235 474 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 CCL11P51671 97 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 EMP2P54851 167 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 FOXL2P58012 376 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 MAT1AQ00266 395 aaKnown RBP18.18■□□□□ 0.5
SYNE4-202ENST00000340477 TGM3Q08188 693 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 PCBP2Q15366 365 aaKnown RBP eCLIP18.18■□□□□ 0.56e-14■■■□□ 14.7
SYNE4-202ENST00000340477 TUBB8Q3ZCM7 444 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 MINDY4Q4G0A6 757 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 DEFB134Q4QY38 66 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 LACTB2Q53H82 288 aaPredicted RBP18.18■□□□□ 0.5
SYNE4-202ENST00000340477 IRAK1BP1Q5VVH5 260 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 PRSS41Q7RTY9 318 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 OR51Q1Q8NH59 317 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 METTL21AQ8WXB1 218 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 GAL3ST3Q96A11 431 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 MOCOSQ96EN8 888 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms