RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 UTS2BQ765I0 119 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 ASCC1Q8N9N2 400 aaKnown RBP18.12■□□□□ 0.49
PSPC1-201ENST00000338910 LRRC3BQ96PB8 259 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 COPS8Q99627 209 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 IPPKQ9H8X2 491 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 PRDM8Q9NQV8 689 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 RASSF1Q9NS23 344 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 MBD1Q9UIS9 605 aaPredicted RBP18.12■□□□□ 0.49
PSPC1-201ENST00000338910 OR7A17O14581 309 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 SSX4O60224 188 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 PCDHGA12O60330 932 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 C1SP09871 688 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 SLC2A4P14672 509 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 RECQLP46063 649 aaPredicted RBP18.12■□□□□ 0.49
PSPC1-201ENST00000338910 B4GALNT1Q00973 533 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 GPM6BQ13491 265 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 OR2T5Q6IEZ7 315 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 ZNF544Q6NX49 715 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 TTC23LQ6PF05 361 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 TMC5Q6UXY8 1006 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 OR4F6Q8NGB9 312 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 OR2T29Q8NH02 315 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 APH1BQ8WW43 257 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 PPP3R2Q96LZ3 170 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 ZDHHC3Q9NYG2 299 aa18.12■□□□□ 0.49
PSPC1-201ENST00000338910 CCDC59Q9P031 241 aaKnown RBP18.12■□□□□ 0.49
PSPC1-201ENST00000338910 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.12■□□□□ 0.49
PSPC1-201ENST00000338910 PIKFYVEQ9Y2I7 2098 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 CXorf51AA0A1B0GTR3 108 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 PDZK1P1A8MUH7 402 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 ZW10O43264 779 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 MED26O95402 600 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 DEFA1P59665 94 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 DEFA3P59666 94 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 GTF2H3Q13889 308 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 E2F2Q14209 437 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 FAM209AQ5JX71 171 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 KIAA1614Q5VZ46 1190 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 PPP2R2DQ66LE6 453 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 GLB1L3Q8NCI6 653 aaPredicted RBP18.11■□□□□ 0.49
PSPC1-201ENST00000338910 OARD1Q9Y530 152 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 MFN2O95140 757 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 IL6P05231 212 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 CHRNB1P11230 501 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 SPINT3P49223 89 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 ARHGDIAP52565 204 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 PTPN5P54829 565 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 POM121L1PQ3SYA9 428 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 MFSD4BQ5TF39 518 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 DNASE1L2Q92874 299 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 FAM120BQ96EK7 910 aaKnown RBP18.11■□□□□ 0.49
PSPC1-201ENST00000338910 PITX2Q99697 317 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 MYOCQ99972 504 aa18.11■□□□□ 0.49
PSPC1-201ENST00000338910 CPPED1Q9BRF8 314 aaPredicted RBP18.11■□□□□ 0.49
PSPC1-201ENST00000338910 ZNF197O14709 1029 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 MTX2O75431 263 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 APOA1P02647 267 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 GRK5P34947 590 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 OR2B6P58173 313 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 POLR2LP62875 67 aaKnown RBP18.1■□□□□ 0.49
PSPC1-201ENST00000338910 CHRNEQ04844 493 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 ARSIQ5FYB1 569 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 MBOAT1Q6ZNC8 495 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 SLC46A3Q7Z3Q1 461 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 UBQLNLQ8IYU4 475 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 ZNF366Q8N895 744 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 SCAMP4Q969E2 229 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 DPY30Q9C005 99 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 TMPRSS11EQ9UL52 423 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 MKLN1Q9UL63 735 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 SCN8AQ9UQD0 1980 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 MYO9BQ13459 2157 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 LEFTY1O75610 366 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 PRKCAP17252 672 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 CCR7P32248 378 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 ETV6P41212 452 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 ARHGEF7Q14155 803 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 TBCEQ15813 527 aaPredicted RBP18.1■□□□□ 0.49
PSPC1-201ENST00000338910 MILR1Q7Z6M3 343 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 SDR16C5Q8N3Y7 309 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 KRTCAP2Q8N6L1 136 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 SMG7Q92540 1137 aaKnown RBP18.1■□□□□ 0.49
PSPC1-201ENST00000338910 REXO4Q9GZR2 422 aaKnown RBP18.1■□□□□ 0.49
PSPC1-201ENST00000338910 CLMPQ9H6B4 373 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 IL1RAPQ9NPH3 570 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 WWOXQ9NZC7 414 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 EHD3Q9NZN3 535 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 ANGPTL3Q9Y5C1 460 aa18.1■□□□□ 0.49
PSPC1-201ENST00000338910 FPR1P21462 350 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 DNAJA1P31689 397 aaKnown RBP18.09■□□□□ 0.49
PSPC1-201ENST00000338910 HSPA14Q0VDF9 509 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 CDK10Q15131 360 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 TIGD6Q17RP2 521 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 SMUG1Q53HV7 270 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 PRR23CQ6ZRP0 262 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 ENTHD1Q8IYW4 607 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 ST13P5Q8NFI4 369 aaPredicted RBP18.09■□□□□ 0.49
PSPC1-201ENST00000338910 OR52E6Q96RD3 313 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 NUAK2Q9H093 628 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 PDP1Q9P0J1 537 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms