RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 FAM83FQ8NEG4 500 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 OR2AP1Q8NGE2 309 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 DNAJB8Q8NHS0 232 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 CSGALNACT1Q8TDX6 532 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 JPH3Q8WXH2 748 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 PIK3R3Q92569 461 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 DCSTAMPQ9H295 470 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 BRD9Q9H8M2 597 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 SPASTQ9UBP0 616 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 VPS29Q9UBQ0 182 aa15.95■□□□□ 0.14
CDC42EP4-201ENST00000335793 SSX4O60224 188 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 GABRR2P28476 465 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 CD70P32970 193 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 SLC35A2P78381 396 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 CAMK2GQ13555 558 aaPredicted RBP15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 COLEC12Q5KU26 742 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 CPTPQ5TA50 214 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 ZNF551Q7Z340 670 aaPredicted RBP15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 ZSWIM9Q86XI8 627 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 CMTM8Q8IZV2 173 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 DUSP26Q9BV47 211 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 ZMAT5Q9UDW3 170 aaKnown RBP15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 MBD1Q9UIS9 605 aaPredicted RBP15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 GABARAPO95166 117 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 ANXA4P09525 319 aaPredicted RBP15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 XPAP23025 273 aaPredicted RBP15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 KRT20P35900 424 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 MASP1P48740 699 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 ATN1P54259 1190 aaPredicted RBP15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 LMAN2Q12907 356 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 ATAD3CQ5T2N8 411 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 SLC44A2Q8IWA5 706 aaPredicted RBP15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 FOXJ1Q92949 421 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 ACOT13Q9NPJ3 140 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 ABCB8Q9NUT2 735 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 MAU2Q9Y6X3 613 aa15.94■□□□□ 0.14
CDC42EP4-201ENST00000335793 KCNK5O95279 499 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 TP53P04637 393 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 AMD1P17707 334 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 UQCRC1P31930 480 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 RECQLP46063 649 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 SRSF11Q05519 484 aaKnown RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 MAD2L1BPQ15013 274 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 LRIF1Q5T3J3 769 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 TPRG1Q6ZUI0 275 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 MYLIPQ8WY64 445 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 SMG9Q9H0W8 520 aaKnown RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 SGK2Q9HBY8 427 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 CCNB1IP1Q9NPC3 277 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 ANKRD36A6QL64 1941 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 MYO7AQ13402 2215 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 A0A1W2PQ45 241 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 A0A1W2PQY0 241 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 MSL3P1P0C860 447 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 S100A5P33763 92 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 SLC8B1Q6J4K2 584 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 LRRC70Q7Z2Q7 622 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 CALHM3Q86XJ0 350 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 BBS7Q8IWZ6 715 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 C1orf52Q8N6N3 182 aaKnown RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 SUV39H2Q9H5I1 410 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 RDH14Q9HBH5 336 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 ZBTB20Q9HC78 741 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 TNFRSF11BO00300 401 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 TFECO14948 347 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 HOXA2O43364 376 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 AOC2O75106 756 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 ARHGEF15O94989 841 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 ITGAMP11215 1152 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 AOAHP28039 575 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 MAPK8P45983 427 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 SUZ12Q15022 739 aaKnown RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 LAIR1Q6GTX8 287 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 CCBE1Q6UXH8 406 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 TSPYL5Q86VY4 417 aaPredicted RBP15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 OR4K1Q8NGD4 311 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 ACAT2Q9BWD1 397 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 NECTIN3Q9NQS3 549 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 SNX8Q9Y5X2 465 aa15.93■□□□□ 0.14
CDC42EP4-201ENST00000335793 TRBV5-3A0A0A0MS03 114 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 SAP18O00422 153 aaKnown RBP15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 DNAJB5O75953 348 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 C8GP07360 202 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 EPORP19235 508 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 SOAT1P35610 550 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 CDH12P55289 794 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 SPIBQ01892 262 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 LRRC74AQ0VAA2 488 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 CHCHD4Q8N4Q1 142 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 MRPS31Q92665 395 aaKnown RBP15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 TXNDC15Q96J42 360 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 OR2B2Q9GZK3 357 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 EXOSC4Q9NPD3 245 aaKnown RBP15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 AKIP1Q9NQ31 210 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 PATJQ8NI35 1801 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 TRIM64BA6NI03 449 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 M0R129 80 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 HAT1O14929 419 aa15.92■□□□□ 0.14
CDC42EP4-201ENST00000335793 PCDHGA12O60330 932 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms