RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PBX3P40426 434 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PSMD8P48556 350 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 NAA20P61599 178 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 BTKQ06187 659 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PAX8Q06710 450 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ACTN3Q08043 901 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 LGALS3BPQ08380 585 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ATP1A4Q13733 1029 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PAFAH1B3Q15102 231 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TAF12Q16514 161 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CLEC12BQ2HXU8 276 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PRR16Q569H4 304 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF569Q5MCW4 686 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TIMM23BQ5SRD1 257 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CASC10Q5T4H9 136 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 WLSQ5T9L3 541 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ITPRIPL1Q6GPH6 555 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 AFTPHQ6ULP2 937 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SPESP1Q6UW49 350 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ENPP6Q6UWR7 440 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 BEND4Q6ZU67 534 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 FAM122BQ7Z309 247 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CCDC91Q7Z6B0 441 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CALHM1Q8IU99 346 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TP53INP2Q8IXH6 220 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SPPL2AQ8TCT8 520 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 MYOZ3Q8TDC0 251 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ACTRT2Q8TDY3 377 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CA5BP1Q8WTZ4 195 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 FIG4Q92562 907 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TUBGCP3Q96CW5 907 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SPACA9Q96E40 222 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 GIMAP5Q96F15 307 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ZSCAN31Q96LW9 406 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 UQCC2Q9BRT2 126 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 UTP23Q9BRU9 249 aaKnown RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 APOL5Q9BWW9 433 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TSSK1BQ9BXA7 367 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 BHLHE41Q9C0J9 482 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 NCOR1P1Q9H4R4 102 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 C7orf69Q9H7B7 122 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 ACTR5Q9H9F9 607 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PELI2Q9HAT8 420 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 NMUR1Q9HB89 426 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CCDC177Q9NQR7 707 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 C19orf73Q9NVV2 129 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PKD2L2Q9NZM6 624 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CRIM1Q9NZV1 1036 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 POU2F3Q9UKI9 436 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 BOKQ9UMX3 212 aaPredicted RBP1.41□□□□□ -2.18
LINC00643-201ENST00000334389 PCDHGB4Q9UN71 923 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 USP22Q9UPT9 525 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 CDYLQ9Y232 598 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 SIK3Q9Y2K2 1263 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 GRIP1Q9Y3R0 1128 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 UBR4Q5T4S7 5183 aa1.41□□□□□ -2.18
LINC00643-201ENST00000334389 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 SOWAHDA6NJG2 315 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 B9A039 149 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 UGT2B11O75310 529 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ALOX12BO75342 701 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 TNFSF13O75888 250 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 UNC5CO95185 931 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 NADKO95544 446 aaPredicted RBP1.4□□□□□ -2.18
LINC00643-201ENST00000334389 NTN1O95631 604 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 CD74P04233 296 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ZGLP1P0C6A0 271 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 CXCL8P10145 99 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 BMP4P12644 408 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ARSBP15848 533 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ST6GAL1P15907 406 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 GCKP35557 465 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 PCK1P35558 622 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 SOX3P41225 446 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 KIR2DS4P43632 304 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 LIG4P49917 911 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 RAB28P51157 221 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 HSD17B7P56937 341 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 GNA12Q03113 381 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 CHRNB3Q05901 458 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 MESP2Q0VG99 397 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 MSLNQ13421 630 aaPredicted RBP1.4□□□□□ -2.18
LINC00643-201ENST00000334389 RNPS1Q15287 305 aaKnown RBP1.4□□□□□ -2.18
LINC00643-201ENST00000334389 POU4F3Q15319 338 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 NDUFA9Q16795 377 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ME3Q16798 604 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ADPRMQ3LIE5 342 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ANKRD45Q5TZF3 282 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 TXNRD3NBQ6F5E7 133 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 LRRN1Q6UXK5 716 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 Q6YL49 198 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 EP400NLQ6ZTU2 488 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 MTERF4Q7Z6M4 381 aaKnown RBP1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF589Q86UQ0 364 aaPredicted RBP1.4□□□□□ -2.18
LINC00643-201ENST00000334389 LRRTM4Q86VH4 590 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 P3H2Q8IVL5 708 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 TMEM151BQ8IW70 566 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 SRRM1Q8IYB3 904 aaKnown RBP1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ZSCAN4Q8NAM6 433 aaPredicted RBP1.4□□□□□ -2.18
LINC00643-201ENST00000334389 WFDC11Q8NEX6 87 aa1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms