RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ATP6V1HQ9UI12 483 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 C3orf18Q9UK00 162 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 ABCG2Q9UNQ0 655 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 IGLON5A6NGN9 336 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 MAGEB3O15480 346 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 HNRNPCP07910 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
DDX28-201ENST00000332395 PPIBP23284 216 aaKnown RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 DRD3P35462 400 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 CDK3Q00526 305 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 RPA4Q13156 261 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 KCNAB2Q13303 367 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 VEZF1Q14119 521 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 ZNF740Q8NDX6 193 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 OR4A15Q8NGL6 344 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 ZFP90Q8TF47 636 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 SETD7Q8WTS6 366 aaKnown RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 CHFRQ96EP1 664 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 SPATA9Q9BWV2 254 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 LGR4Q9BXB1 951 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 BHLHE41Q9C0J9 482 aaPredicted RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 CHST8Q9H2A9 424 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 TBCCD1Q9NVR7 557 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 SLC23A2Q9UGH3 650 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 VPS4AQ9UN37 437 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 CORO2BQ9UQ03 480 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 SEMG1P04279 462 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 NUDT7P0C024 238 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 KELP23276 732 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 PIK3CBP42338 1070 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 LRRC74AQ0VAA2 488 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 SHQ1Q6PI26 577 aaKnown RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 CBLL1Q75N03 491 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 CHST15Q7LFX5 561 aaPredicted RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 VTCN1Q7Z7D3 282 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 CROCCP3Q8IVE0 287 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 DCUN1D3Q8IWE4 304 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 C2orf73Q8N5S3 287 aaPredicted RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 ARL10Q8N8L6 244 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 OR4K1Q8NGD4 311 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 WDR48Q8TAF3 677 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 TFGQ92734 400 aaPredicted RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 TBC1D20Q96BZ9 403 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 HSPBAP1Q96EW2 488 aa16.71■□□□□ 0.27
DDX28-201ENST00000332395 ZNF282Q9UDV7 671 aaPredicted RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 TMEFF2Q9UIK5 374 aaPredicted RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 YBX2Q9Y2T7 364 aaKnown RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 TDRKHQ9Y2W6 561 aaKnown RBP16.71■□□□□ 0.27
DDX28-201ENST00000332395 MID1O15344 667 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 B4GAT1O43505 415 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 ATP6V1G1O75348 118 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 NTRK1P04629 796 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 ABCB1P08183 1280 aaPredicted RBP16.7■□□□□ 0.26
DDX28-201ENST00000332395 TAS2R38P59533 333 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 RGNQ15493 299 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 WSCD2Q2TBF2 565 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 AGBL4Q5VU57 503 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 OR2T5Q6IEZ7 315 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 LCTLQ6UWM7 567 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 EIF3MQ7L2H7 374 aaKnown RBP16.7■□□□□ 0.26
DDX28-201ENST00000332395 LRRTM4Q86VH4 590 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 OR2T29Q8NH02 315 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 UBE2E3Q969T4 207 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 PLA2G2FQ9BZM2 168 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 TM7SF3Q9NS93 570 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 FAIMQ9NVQ4 179 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 PCDHGA8Q9Y5G5 932 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 hCG_2039718K7EN88 272 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 PCDH8O95206 1070 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 FABP3P05413 133 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 WASP42768 502 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 TPD52P55327 224 aaPredicted RBP16.7■□□□□ 0.26
DDX28-201ENST00000332395 PHEXP78562 749 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.7■□□□□ 0.26
DDX28-201ENST00000332395 TMIGD1Q6UXZ0 262 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 TMEM26Q6ZUK4 368 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 DCP2Q8IU60 420 aaKnown RBP16.7■□□□□ 0.26
DDX28-201ENST00000332395 CLVS1Q8IUQ0 354 aaPredicted RBP16.7■□□□□ 0.26
DDX28-201ENST00000332395 METTL4Q8N3J2 472 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 C16orf78Q8WTQ4 265 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 SNRNP27Q8WVK2 155 aaKnown RBP16.7■□□□□ 0.26
DDX28-201ENST00000332395 HSH2DQ96JZ2 352 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 ACAT2Q9BWD1 397 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 IGFLR1Q9H665 355 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 POLR1BQ9H9Y6 1135 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 TM9SF3Q9HD45 589 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 ATAD3AQ9NVI7 634 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 STON1Q9Y6Q2 735 aa16.7■□□□□ 0.26
DDX28-201ENST00000332395 RANBP2P49792 3224 aaKnown RBP16.69■□□□□ 0.26
DDX28-201ENST00000332395 FURINP09958 794 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 RAD23AP54725 363 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 HBA1P69905 142 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 VLDLRP98155 873 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 MC1RQ01726 317 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 PMS2P3Q13401 168 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 CAMK2GQ13555 558 aaPredicted RBP16.69■□□□□ 0.26
DDX28-201ENST00000332395 PDE7AQ13946 482 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 RFX4Q33E94 735 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 IER5LQ5T953 404 aa16.69■□□□□ 0.26
DDX28-201ENST00000332395 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.69■□□□□ 0.26
DDX28-201ENST00000332395 KCTD8Q6ZWB6 473 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms