RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TGDSO95455 350 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 CSF2P04141 144 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 GRIA1P42261 906 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 GNG2P59768 71 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 RPS3AP61247 264 aaKnown RBP10.25□□□□□ -0.77
CLN8-201ENST00000331222 SNTA1Q13424 505 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 FLYWCH1Q4VC44 716 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 ADGRD2Q7Z7M1 963 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 TDRPQ86YL5 185 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 ERI1Q8IV48 349 aaKnown RBP10.25□□□□□ -0.77
CLN8-201ENST00000331222 CELF5Q8N6W0 485 aaKnown RBP10.25□□□□□ -0.77
CLN8-201ENST00000331222 OR8K5Q8NH50 307 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 THRSPQ92748 146 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 TPSD1Q9BZJ3 242 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 RNF39Q9H2S5 420 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 KIDINS220Q9ULH0 1771 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 A0A1W2PQ45 241 aaPredicted RBP10.25□□□□□ -0.77
CLN8-201ENST00000331222 A0A1W2PQY0 241 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 LOC730098B7Z3J9 87 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 ZNF670-ZNF695F2Z2N8 137 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 M0R129 80 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 PIM1P11309 404 aaPredicted RBP10.25□□□□□ -0.77
CLN8-201ENST00000331222 CCNFP41002 786 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 FKBP1BP68106 108 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 KLHL22Q53GT1 634 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 C3orf33Q6P1S2 294 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 ZNF709Q8N972 641 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 OR13C3Q8NGS6 347 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 RAB8BQ92930 207 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 SLC22A18Q96BI1 424 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 HSD17B14Q9BPX1 270 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 MED11Q9P086 117 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 RNF11Q9Y3C5 154 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 PCDHGB7Q9Y5F8 929 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 A0A0D9SEW6 157 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 ARVCFO00192 962 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 JUPP14923 745 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 LRIT3Q3SXY7 679 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 FAM76BQ5HYJ3 339 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 DCDC5Q6ZRR9 648 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 SHISA6Q6ZSJ9 500 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 ZNF100Q8IYN0 542 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 OR6N2Q8NGY6 317 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 BORCS5Q969J3 196 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 PNPLA2Q96AD5 504 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 MRM3Q9HC36 420 aaKnown RBP10.25□□□□□ -0.77
CLN8-201ENST00000331222 ZNF446Q9NWS9 450 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 ZDHHC3Q9NYG2 299 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 LIMK2P53671 638 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 RNF130Q86XS8 419 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 PGAM4Q8N0Y7 254 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 OR6Q1Q8NGQ2 317 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 RAB21Q9UL25 225 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 GPR34Q9UPC5 381 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 SH2B3Q9UQQ2 575 aa10.25□□□□□ -0.77
CLN8-201ENST00000331222 EDDM13A0A1B0GTR0 161 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 TLX2O43763 284 aaPredicted RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 DNAJA1P31689 397 aaKnown RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 ARL2P36404 184 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 DSC3Q14574 896 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 SLC15A3Q8IY34 581 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 OR4K1Q8NGD4 311 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 SLC13A3Q8WWT9 602 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 KLHDC7BQ96G42 594 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 NUFIP1Q9UHK0 495 aaKnown RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 ILVBLA1L0T0 632 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 SOCS2O14508 198 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 EDF1O60869 148 aaKnown RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 BCKDHAP12694 445 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 CSNK2A2P19784 350 aaPredicted RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 ZNF776Q68DI1 518 aaPredicted RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 FANK1Q8TC84 345 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 IRGQQ8WZA9 623 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 RFT1Q96AA3 541 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 EBF4Q9BQW3 602 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 KCNN3Q9UGI6 736 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 AGPSO00116 658 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 AGTR2P50052 363 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 AFF1P51825 1210 aaKnown RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 CAV3P56539 151 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 NUDT13Q86X67 352 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 ZNF347Q96SE7 839 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 AKTIPQ9H8T0 292 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 EIF2B3Q9NR50 452 aaKnown RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 PPP1R14DQ9NXH3 145 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 B3GALT1Q9Y5Z6 326 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 H7BY64 318 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 TLR4O00206 839 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 CBFA2T3O75081 653 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 ASLP04424 464 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 TAS2R39P59534 338 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 UFM1P61960 85 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 SOWAHAQ2M3V2 549 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 DNM1P34Q6PK57 102 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 USP43Q70EL4 1123 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 SORCS1Q8WY21 1168 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 TFGQ92734 400 aaPredicted RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 PRAP1Q96NZ9 151 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 USP29Q9HBJ7 922 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 YIPF1Q9Y548 306 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms