RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CXCR2P25025 360 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 UQCRC1P31930 480 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 DSTNP60981 165 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 GSTM4Q03013 218 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 PUDPQ08623 228 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 CBLBQ13191 982 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 SLBPQ14493 270 aaKnown RBP eCLIP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 STEAP3Q658P3 488 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 METTL4Q8N3J2 472 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 FAM46DQ8NEK8 389 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 UBE2FQ969M7 185 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 RELTQ969Z4 430 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 TEX37Q96LM6 180 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 MND1Q9BWT6 205 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 TTTY10Q9BZA0 68 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 PPIL3Q9H2H8 161 aaKnown RBP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 THG1LQ9NWX6 298 aaKnown RBP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 GJD2Q9UKL4 321 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 B3GNT3Q9Y2A9 372 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 PRAMEF11O60813 436 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 C8GP07360 202 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 CCL23P55773 120 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 SLC3A1Q07837 685 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 TGM3Q08188 693 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 ZMYND11Q15326 602 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 ANKRD34AQ69YU3 496 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 TMEM220Q6QAJ8 160 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 NRARPQ7Z6K4 114 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 TOMM5Q8N4H5 51 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 CELF2-AS1Q8N7Q2 184 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 OR9Q2Q8NGE9 314 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 KHSRPQ92945 711 aaKnown RBP eCLIP13.58□□□□□ -0.24
EPHB3-201ENST00000330394 SNAPC3Q92966 411 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 TMEM80Q96HE8 168 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 MAPKAP1Q9BPZ7 522 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 TSSK6Q9BXA6 273 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 MROQ9BYG7 248 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 MAF1Q9H063 256 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 KCNN2Q9H2S1 579 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 ENAMQ9NRM1 1142 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 GPRC5BQ9NZH0 403 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 PPIEQ9UNP9 301 aaKnown RBP13.58□□□□□ -0.24
EPHB3-201ENST00000330394 TRAV19A0A0A6YYK7 116 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 SCAMP1O15126 338 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 SMAD9O15198 467 aaKnown RBP13.58□□□□□ -0.24
EPHB3-201ENST00000330394 HOXA2O43364 376 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 ATG13O75143 517 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 NUDT14O95848 222 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 RAB8AP61006 207 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 AP1S1P61966 158 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 MEF2AQ02078 507 aaPredicted RBP13.58□□□□□ -0.24
EPHB3-201ENST00000330394 AGAP6Q5VW22 663 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 OLFML2AQ68BL7 652 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 TICAM1Q8IUC6 712 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 PIANPQ8IYJ0 282 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 PIAS4Q8N2W9 510 aaPredicted RBP13.58□□□□□ -0.24
EPHB3-201ENST00000330394 FAM86B1Q8N7N1 296 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 LILRB4Q8NHJ6 448 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 SLC22A17Q8WUG5 538 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 RFKQ969G6 155 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 CLIP3Q96DZ5 547 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 EGLN2Q96KS0 407 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 AGAP4Q96P64 663 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 ERMAPQ96PL5 475 aaPredicted RBP13.58□□□□□ -0.24
EPHB3-201ENST00000330394 MRPL17Q9NRX2 175 aaKnown RBP13.58□□□□□ -0.24
EPHB3-201ENST00000330394 IMP3Q9NV31 184 aaKnown RBP13.58□□□□□ -0.24
EPHB3-201ENST00000330394 CD300AQ9UGN4 299 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 TBC1D24Q9ULP9 559 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 ABHD14A-ACY1A0A1B0GW23 586 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 DAPL1A0PJW8 107 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 WNT9AO14904 365 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 ADAM23O75077 832 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 EPOP01588 193 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 CSKP41240 450 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 TAS2R50P59544 299 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 CD300CQ08708 224 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 RUNDC3AQ59EK9 446 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 SPRED1Q7Z699 444 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 PARP16Q8N5Y8 322 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 TMEM174Q8WUU8 243 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 C1QTNF1Q9BXJ1 281 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 HDHD5Q9BXW7 423 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 RSPH9Q9H1X1 276 aaPredicted RBP13.58□□□□□ -0.24
EPHB3-201ENST00000330394 ACOT13Q9NPJ3 140 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 NANSQ9NR45 359 aa13.58□□□□□ -0.24
EPHB3-201ENST00000330394 IRGMA1A4Y4 181 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 HNRNPFP52597 415 aaKnown RBP13.57□□□□□ -0.24
EPHB3-201ENST00000330394 FCGRTP55899 365 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 FGFBP1Q14512 234 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 BEND5Q7L4P6 421 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 GALNT6Q8NCL4 622 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 SNX33Q8WV41 574 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 TMEM40Q8WWA1 233 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 DEDD2Q8WXF8 326 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 CCM2Q9BSQ5 444 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 DPCDQ9BVM2 203 aaPredicted RBP13.57□□□□□ -0.24
EPHB3-201ENST00000330394 MBD2Q9UBB5 411 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 EXTL2Q9UBQ6 330 aa13.57□□□□□ -0.24
EPHB3-201ENST00000330394 SPO11Q9Y5K1 396 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms