RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 FNDC3AQ9Y2H6 1198 aaKnown RBP12.32□□□□□ -0.44
CCDC60-201ENST00000327554 ACTL7AQ9Y615 435 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 HYKKA2RU49 373 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 SH3D21A4FU49 640 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 FZD9O00144 591 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 TNFRSF10BO14763 440 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 FPGTO14772 594 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 TSPAN3O60637 253 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 PDE9AO76083 593 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 OR7A10O76100 309 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 NUDT7P0C024 238 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 FAM157BP0CG42 384 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 PRPS2P11908 318 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 ANXA8P13928 327 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 SSTR4P31391 388 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 TIGD5Q53EQ6 642 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 ZBTB37Q5TC79 503 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 MSANTD1Q6ZTZ1 278 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 ZNF598Q86UK7 904 aaKnown RBP12.32□□□□□ -0.44
CCDC60-201ENST00000327554 LGI4Q8N135 537 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 C9orf62Q8N4C0 152 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 ZC3HAV1LQ96H79 300 aaKnown RBP12.32□□□□□ -0.44
CCDC60-201ENST00000327554 DIRAS2Q96HU8 199 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 C8orf48Q96LL4 319 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 PAAF1Q9BRP4 392 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 ABCG8Q9H221 673 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 ING3Q9NXR8 418 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 OGDHLQ9ULD0 1010 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 STUB1Q9UNE7 303 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 A0A1W2PQL4 384 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 C2orf81A6NN90 581 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 WWP2O00308 870 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 SUV39H1O43463 412 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 SCN2BO60939 215 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 EPN2O95208 641 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 PDYNP01213 254 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 PRLP01236 227 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 MAP2K3P46734 347 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 MXD1Q05195 221 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 CACNB2Q08289 660 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 MTAPQ13126 283 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 SUZ12Q15022 739 aaKnown RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 PYDC2Q56P42 97 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 CCSAPQ6IQ19 270 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 FBXL22Q6P050 247 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 RASAL3Q86YV0 1011 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 SLC44A2Q8IWA5 706 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 SLC43A3Q8NBI5 491 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 OR52J3Q8NH60 311 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 DNAJB3Q8WWF6 145 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 SLC25A46Q96AG3 418 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 PANX1Q96RD7 426 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 ACAT2Q9BWD1 397 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 PDFQ9HBH1 243 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 MCUBQ9NWR8 336 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 PLEKHB1Q9UF11 243 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 NDRG2Q9UN36 371 aaKnown RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 RABL2BQ9UNT1 228 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 OARD1Q9Y530 152 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 OTOFQ9HC10 1997 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 POLR2AP24928 1970 aaKnown RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 TRAV19A0A0A6YYK7 116 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 RRN3P2A6NIE6 340 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 ADAMDEC1O15204 470 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 CSO75390 466 aaKnown RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 TPPPO94811 219 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 CCNB2O95067 398 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 CDRT1O95170 752 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 LGI1O95970 557 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 MMP3P08254 477 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 TSPAN19P0C672 248 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 PIPP12273 146 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 CKMT1AP12532 417 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 TNFRSF1BP20333 461 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 LPOP22079 712 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 PTGER3P43115 390 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 KIR3DL1P43629 444 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 RGRP47804 291 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 SLC9A3P48764 834 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 ALDH9A1P49189 494 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 WNT3P56703 355 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 RRAS2P62070 204 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 MGAT3Q09327 533 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 ABRQ12979 859 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 MADCAM1Q13477 382 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 MICAQ29983 383 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 EXOC3L2Q2M3D2 409 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 HKDC1Q2TB90 917 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 LCN1P1Q5VSP4 162 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 ZNF621Q6ZSS3 439 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 ABI3BPQ7Z7G0 1075 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 C2orf69Q8N8R5 385 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 DUSP18Q8NEJ0 188 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 OR9Q2Q8NGE9 314 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 DNAJA4Q8WW22 397 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 KIAA1143Q96AT1 154 aaPredicted RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 DCLRE1CQ96SD1 692 aaKnown RBP12.31□□□□□ -0.44
CCDC60-201ENST00000327554 EGFL8Q99944 293 aa12.31□□□□□ -0.44
CCDC60-201ENST00000327554 ACBD6Q9BR61 282 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms