RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 SPNS1Q9H2V7 528 aa20.58■□□□□ 0.89
LIMS2-201ENST00000324938 OCEL1Q9H607 264 aa20.58■□□□□ 0.89
LIMS2-201ENST00000324938 ATAD3AQ9NVI7 634 aa20.58■□□□□ 0.89
LIMS2-201ENST00000324938 MYO1GB0I1T2 1018 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 MITFO75030 526 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-201ENST00000324938 DAPP51397 102 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 RPS6KA3P51812 740 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 CRYBA2P53672 197 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 FAM83HQ6ZRV2 1179 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-201ENST00000324938 MMAAQ8IVH4 418 aaKnown RBP20.57■□□□□ 0.88
LIMS2-201ENST00000324938 SPARTQ8N0X7 666 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 SETD7Q8WTS6 366 aaKnown RBP20.57■□□□□ 0.88
LIMS2-201ENST00000324938 MYNNQ9NPC7 610 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 TSC22D4Q9Y3Q8 395 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 C1QTNF3-AMACRE9PGA6 284 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 SLC1A7O00341 560 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 PI15O43692 258 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 DPM1O60762 260 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 UGT2B11O75310 529 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 FKBP9O95302 570 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 HTR1AP08908 422 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 RPL3P39023 403 aaKnown RBP20.57■□□□□ 0.88
LIMS2-201ENST00000324938 PIK3CBP42338 1070 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 HPCAP84074 193 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 DSG4Q86SJ6 1040 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 SGCDQ92629 289 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 ZNF566Q969W8 418 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 COX14Q96I36 57 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 MAGED4Q96JG8 741 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 HDAC8Q9BY41 377 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 OR51B5Q9H339 312 aa20.57■□□□□ 0.88
LIMS2-201ENST00000324938 TRIT1Q9H3H1 467 aaKnown RBP20.57■□□□□ 0.88
LIMS2-201ENST00000324938 HEMK1Q9Y5R4 338 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-201ENST00000324938 CHD9Q3L8U1 2897 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 DIRAS1O95057 198 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 TGFB1P01137 390 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 FURINP09958 794 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 AGXTP21549 392 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 P2RY2P41231 377 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 MEF2AQ02078 507 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-201ENST00000324938 LAPTM4AQ15012 233 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 TEAD4Q15561 434 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 IQCCQ4KMZ1 466 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 PRAMEF14Q5SWL7 426 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.56■□□□□ 0.88
LIMS2-201ENST00000324938 PRAMEF13Q5VWM6 474 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 GALNT5Q7Z7M9 940 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 PDZD3Q86UT5 571 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 METTL4Q8N3J2 472 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 C11orf65Q8NCR3 313 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 SETD9Q8NE22 299 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 WDR48Q8TAF3 677 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 UBE2E3Q969T4 207 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 RAB7BQ96AH8 199 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 NAA50Q9GZZ1 169 aaKnown RBP20.56■□□□□ 0.88
LIMS2-201ENST00000324938 FAF1Q9UNN5 650 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-201ENST00000324938 NAALAD2Q9Y3Q0 740 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 SAMHD1Q9Y3Z3 626 aaKnown RBP20.56■□□□□ 0.88
LIMS2-201ENST00000324938 PCYT1BQ9Y5K3 369 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-201ENST00000324938 MVDP53602 400 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 TMBIM6P55061 237 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 PHEXP78562 749 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 RPA4Q13156 261 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 DCTN2Q13561 401 aaKnown RBP20.56■□□□□ 0.88
LIMS2-201ENST00000324938 RAPSNQ13702 412 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 KEAP1Q14145 624 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 LCTLQ6UWM7 567 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 ADAMTSL4Q6UY14 1074 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 NAGSQ8N159 534 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 PLA2G15Q8NCC3 412 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 C16orf78Q8WTQ4 265 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 SUSD6Q92537 303 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 FGF13Q92913 245 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 RAD51AP1Q96B01 352 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 C7orf34Q96L11 122 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 DCUN1D5Q9BTE7 237 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 ADPRHL2Q9NX46 363 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 ASF1AQ9Y294 204 aa20.56■□□□□ 0.88
LIMS2-201ENST00000324938 TRPM6Q9BX84 2022 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 NOL3O60936 208 aaKnown RBP20.55■□□□□ 0.88
LIMS2-201ENST00000324938 KLHL18O94889 574 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 NTRK1P04629 796 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 CCDC159P0C7I6 412 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 MATN1P21941 496 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 IL12RB1P42701 662 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 HBA1P69905 142 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 KCNJ10P78508 379 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 PDGFRLQ15198 375 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 GTF2IRD2BQ6EKJ0 949 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 FAM71E1Q6IPT2 247 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 GTF2IRD2Q86UP8 949 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 OR4K1Q8NGD4 311 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 MAL2Q969L2 176 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 TPD52L3Q96J77 140 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 TMEM106CQ9BVX2 250 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 REEP1Q9H902 201 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 PDP1Q9P0J1 537 aaPredicted RBP20.55■□□□□ 0.88
LIMS2-201ENST00000324938 TMEM98Q9Y2Y6 226 aa20.55■□□□□ 0.88
LIMS2-201ENST00000324938 SAP18O00422 153 aaKnown RBP20.54■□□□□ 0.88
LIMS2-201ENST00000324938 SUV39H1O43463 412 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms