RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PPHLN1Q8NEY8 458 aaKnown RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 PSMF1Q92530 271 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 NTNG2Q96CW9 530 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 COQ10AQ96MF6 247 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 NSMCE3Q96MG7 304 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 ZNF641Q96N77 438 aaPredicted RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 SP110Q9HB58 689 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 SMYD2Q9NRG4 433 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 INTS9Q9NV88 658 aaKnown RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 RBM22Q9NW64 420 aaKnown RBP eCLIP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 HACD3Q9P035 362 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 COX16Q9P0S2 106 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 SAMD15Q9P1V8 674 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 SERTAD3Q9UJW9 196 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 A0A1W2PQ72 361 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 DFFAO00273 331 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 H2AFYO75367 372 aaKnown RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 CD160O95971 181 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 ALBP02768 609 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 ELFN1P0C7U0 828 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 OGNP20774 298 aaKnown RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 MGAT1P26572 445 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 OR1E1P30953 314 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 NAA20P61599 178 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 ARF5P84085 180 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 VLDLRP98155 873 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 SPARCL1Q14515 664 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 SLC1A5Q15758 541 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 ARHGAP36Q6ZRI8 547 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 ANKMY2Q8IV38 441 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 MDS2Q8NDY4 140 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 PLEKHG4BQ96PX9 1271 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 GPR22Q99680 433 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 TM6SF2Q9BZW4 377 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 NSRP1Q9H0G5 558 aaKnown RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 SIK2Q9H0K1 926 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 MPP6Q9NZW5 540 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 ZFATQ9P243 1243 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 NFKBIL1Q9UBC1 381 aaPredicted RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 UBA2Q9UBT2 640 aaPredicted RBP6.28□□□□□ -1.4
CSTF3-201ENST00000323959 DCDC2Q9UHG0 476 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 COMMD10Q9Y6G5 202 aa6.28□□□□□ -1.4
CSTF3-201ENST00000323959 A0A1W2PPR1 153 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 UBA6A0AVT1 1052 aaPredicted RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 LINC01387J3KSC0 135 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 KCNK1O00180 336 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 APOA4P06727 396 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 PIM1P11309 404 aaPredicted RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 GM2AP17900 193 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 GKP32189 559 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 SPRP35270 261 aaPredicted RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 CYTH1Q15438 398 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 TYSND1Q2T9J0 566 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 OR52K1Q8NGK4 314 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 GCDHQ92947 438 aaPredicted RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 TCF12Q99081 682 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 RBM4Q9BWF3 364 aaKnown RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 RHOJQ9H4E5 214 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 NKIRAS1Q9NYS0 192 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 SCHIP1Q9P0W5 487 aaPredicted RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 LHX3Q9UBR4 397 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 NKX1-2Q9UD57 310 aaPredicted RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 HAO1Q9UJM8 370 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 PLLPQ9Y342 182 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 GOLGA8MH3BSY2 632 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 GAPDHSO14556 408 aaPredicted RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 GLRA3O75311 464 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 ALOX12BO75342 701 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 AVILO75366 819 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 NDST3O95803 873 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 GLI4P10075 376 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 CD46P15529 392 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 ITGAXP20702 1163 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 SERPINB8P50452 374 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 CASP9P55211 416 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 WNT3AP56704 352 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 MPP2Q14168 576 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 CCDC153Q494R4 210 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 TSTD2Q5T7W7 516 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 RHBDD2Q6NTF9 364 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 OR11G2Q8NGC1 345 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 OR1L3Q8NH93 324 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 BRSK1Q8TDC3 778 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 STYXQ8WUJ0 223 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 CELF6Q96J87 481 aaKnown RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 CCT8L2Q96SF2 557 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 INTS10Q9NVR2 710 aaKnown RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 NLE1Q9NVX2 485 aaPredicted RBP6.27□□□□□ -1.41
CSTF3-201ENST00000323959 MED29Q9NX70 200 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 MID2Q9UJV3 735 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 IKBKGQ9Y6K9 419 aa6.27□□□□□ -1.41
CSTF3-201ENST00000323959 A0A0G2JNJ9 132 aa6.26□□□□□ -1.41
CSTF3-201ENST00000323959 J3KR12 359 aa6.26□□□□□ -1.41
CSTF3-201ENST00000323959 INSIG1O15503 277 aa6.26□□□□□ -1.41
CSTF3-201ENST00000323959 CNOT3O75175 753 aaKnown RBP6.26□□□□□ -1.41
CSTF3-201ENST00000323959 BANF1O75531 89 aa6.26□□□□□ -1.41
CSTF3-201ENST00000323959 PRR35P0CG20 571 aa6.26□□□□□ -1.41
CSTF3-201ENST00000323959 ZNF24P17028 368 aa6.26□□□□□ -1.41
CSTF3-201ENST00000323959 EEF1DP29692 281 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms