RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 ZNF689Q96CS4 500 aaPredicted RBP13.1□□□□□ -0.31
SRRM1-201ENST00000323848 MRPS26Q9BYN8 205 aaKnown RBP13.1□□□□□ -0.31
SRRM1-201ENST00000323848 DBTP11182 482 aaKnown RBP13.1□□□□□ -0.31
SRRM1-201ENST00000323848 ALAS2P22557 587 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 CXCR2P25025 360 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 MAOBP27338 520 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 P2RY2P41231 377 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 ASMTP46597 345 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 NCBP2P52298 156 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■■□□□ 13.8
SRRM1-201ENST00000323848 THAP5Q7Z6K1 395 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 TMCO5AQ8N6Q1 288 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 ARSGQ96EG1 525 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 CMTM7Q96FZ5 175 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 ART5Q96L15 291 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 ZNF229Q9UJW7 825 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 CYP8B1Q9UNU6 501 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 RGPD3A6NKT7 1758 aaPredicted RBP13.1□□□□□ -0.31
SRRM1-201ENST00000323848 RGPD4Q7Z3J3 1758 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 CDH23Q9H251 3354 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 PIPSLA2A3N6 862 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 IMPA1P29218 277 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 CSNK1DP48730 415 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 BTN3A2P78410 334 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 MED22Q15528 200 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 NNATQ16517 81 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 DEFB110Q30KQ9 67 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 GCNT6Q5T4J0 391 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 LILRA6Q6PI73 481 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 TTC29Q8NA56 475 aaPredicted RBP13.1□□□□□ -0.31
SRRM1-201ENST00000323848 PDPRQ8NCN5 879 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 DPH7Q9BTV6 452 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 ANKRA2Q9H9E1 313 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 TRPS1Q9UHF7 1281 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 IRAK3Q9Y616 596 aa13.1□□□□□ -0.31
SRRM1-201ENST00000323848 SCN2AQ99250 2005 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 KPNA4O00629 521 aaPredicted RBP13.09□□□□□ -0.31
SRRM1-201ENST00000323848 SCELO95171 688 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 C1GALT1C1LP0DN25 315 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 TCEA1P23193 301 aaKnown RBP13.09□□□□□ -0.31
SRRM1-201ENST00000323848 AMZ1Q400G9 498 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 ANXA8L1Q5VT79 327 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 XKR5Q6UX68 686 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 Q6ZPB1 254 aaPredicted RBP13.09□□□□□ -0.31
SRRM1-201ENST00000323848 LEMD2Q8NC56 503 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 VN1R2Q8NFZ6 395 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 DTD2Q96FN9 168 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 SPACA7Q96KW9 195 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 RAD21L1Q9H4I0 556 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 SFXN1Q9H9B4 322 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 RIMKLBQ9ULI2 386 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 CDC14AQ9UNH5 594 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 SLC27A6Q9Y2P4 619 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 TPRP12270 2363 aaKnown RBP13.09□□□□□ -0.31
SRRM1-201ENST00000323848 GABRR3A8MPY1 467 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 CD9P21926 228 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 NAA20P61599 178 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 CAMK1Q14012 370 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 SCARB2Q14108 478 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 RPS26P11Q5JNZ5 115 aaPredicted RBP13.09□□□□□ -0.31
SRRM1-201ENST00000323848 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.09□□□□□ -0.31
SRRM1-201ENST00000323848 OTUB2Q96DC9 234 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 EFCAB11Q9BUY7 163 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 CEP44Q9C0F1 390 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 MBNL1Q9NR56 388 aaKnown RBP13.09□□□□□ -0.31
SRRM1-201ENST00000323848 SMIM30A4D0T7 59 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 PPM1DO15297 605 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 AVPR1BP47901 424 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 MYBPC1Q00872 1141 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 DEFB134Q4QY38 66 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 CLEC12AQ5QGZ9 265 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 CYHR1Q6ZMK1 362 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 R3HCC1LQ7Z5L2 792 aaKnown RBP13.09□□□□□ -0.31
SRRM1-201ENST00000323848 ZNF605Q86T29 641 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 GATA6Q92908 595 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 RSPRY1Q96DX4 576 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 APOL4Q9BPW4 351 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 SLC6A13Q9NSD5 602 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 DNAJB9Q9UBS3 223 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 ANGPT4Q9Y264 503 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 SLC9A8Q9Y2E8 581 aa13.09□□□□□ -0.31
SRRM1-201ENST00000323848 PCM1Q15154 2024 aa13.08□□□□□ -0.31
SRRM1-201ENST00000323848 FXYD1O00168 92 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 KIAA0355O15063 1070 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 IFNA14P01570 189 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 ACPPP15309 386 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 ILF3Q12906 894 aaKnown RBP eCLIP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 ZNF77Q15935 545 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 CARTPTQ16568 116 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 BROXQ5VW32 411 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 CBARPQ8N350 705 aaPredicted RBP13.08□□□□□ -0.32
SRRM1-201ENST00000323848 C7orf57Q8NEG2 295 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 SLC29A3Q9BZD2 475 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 RMI1Q9H9A7 625 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 PREBQ9HCU5 417 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 ITM2CQ9NQX7 267 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 PIAS3Q9Y6X2 628 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 A0A1W2PPW3 197 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 FAM220BPB1ANY3 271 aa13.08□□□□□ -0.32
SRRM1-201ENST00000323848 H7C0S8 307 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms