RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 FAM46DQ8NEK8 389 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 OR2AP1Q8NGE2 309 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 MAL2Q969L2 176 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 MCMBPQ9BTE3 642 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SUV39H2Q9H5I1 410 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SEC14L4Q9UDX3 406 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 POP4O95707 220 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 TGFB1P01137 390 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 CSF2P04141 144 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 POLR2EP19388 210 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 NTSP30990 170 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 AGTRAPQ6RW13 159 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 TP63Q9H3D4 680 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 CDV3Q9UKY7 258 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 IFT52Q9Y366 437 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 TRAV19A0A0A6YYK7 116 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 GBAP04062 536 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 LAMP1P11279 417 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 PSKH1P11801 424 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 CKMT1AP12532 417 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 ATP1B2P14415 290 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 CXCR2P25025 360 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 DSTNP60981 165 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 HEPACAMQ14CZ8 416 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 GPAT3Q53EU6 434 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 KLHL12Q53G59 568 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 GPRC6AQ5T6X5 926 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 LDLRAD1Q5T700 205 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 AFMIDQ63HM1 303 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 BICRALQ6AI39 1079 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SLC22A15Q8IZD6 547 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SUN5Q8TC36 379 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 KCTD7Q96MP8 289 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 GPR62Q9BZJ7 368 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 UCK2Q9BZX2 261 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 TBC1D14Q9P2M4 693 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF222Q9UK12 451 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SPATA2Q9UM82 520 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 ASF1AQ9Y294 204 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 MAN2B2Q9Y2E5 1009 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 MRPS7Q9Y2R9 242 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 ASB1Q9Y576 335 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 ARID2Q68CP9 1835 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 MYADML2A6NDP7 307 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 TPST2O60704 377 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 C6orf47O95873 294 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF630Q2M218 657 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 ARHGAP15Q53QZ3 475 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 CARD16Q5EG05 197 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SYCE2Q6PIF2 218 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 CEP68Q76N32 757 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 DENND6BQ8NEG7 585 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SH3RF2Q8TEC5 729 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 TP53INP1Q96A56 240 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 FRMD6Q96NE9 622 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 IL37Q9NZH6 218 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 UTS2RQ9UKP6 389 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 GRIP1Q9Y3R0 1128 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 ASPDHA6ND91 283 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 DNTTP04053 509 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 ELFN1P0C7U0 828 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 HOXD8P13378 290 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 JUPP14923 745 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 TNFRSF1BP20333 461 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 RPS3P23396 243 aaKnown RBP eCLIP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 CSTF2P33240 577 aaKnown RBP eCLIP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 ZXDBP98169 803 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 TBCEQ15813 527 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 SBSNQ6UWP8 590 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 PRR23CQ6ZRP0 262 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 LIMS2Q7Z4I7 341 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 MMAAQ8IVH4 418 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 MND1Q9BWT6 205 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 OSGEPL1Q9H4B0 414 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 IL26Q9NPH9 171 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 CPNE3O75131 537 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 ERAL1O75616 437 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 STC2O76061 302 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 ARHGEF15O94989 841 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 DHFRP00374 187 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 ATXN8OSP0DMR3 200 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 SLC6A4P31645 630 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 CA5AP35218 305 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 MAPK9P45984 424 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 SLC35A2P78381 396 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 VLDLRP98155 873 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 SLBPQ14493 270 aaKnown RBP eCLIP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 PTPRRQ15256 657 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 AAK1Q2M2I8 961 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 PYCR3Q53H96 274 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 STEAP3Q658P3 488 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 XAF1Q6GPH4 301 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 C8orf82Q6P1X6 216 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 CDH24Q86UP0 819 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 ADGRG2Q8IZP9 1017 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 C2orf73Q8N5S3 287 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 DBF4BQ8NFT6 615 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 EXOSC8Q96B26 276 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 CCDC32Q9BV29 185 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms