RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SLC9A3P48764 834 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ASCL1P50553 236 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 C21orf58P58505 322 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 LRRC63Q05C16 580 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 KRT31Q15323 416 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 PKN2Q16513 984 aaKnown RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 SMU1Q2TAY7 513 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CEP55Q53EZ4 464 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 TMEM35AQ53FP2 167 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 NDUFAF5Q5TEU4 345 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 FAM109BQ6ICB4 259 aaPredicted RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 C11orf87Q6NUJ2 197 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 SYCE2Q6PIF2 218 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 EGFL6Q8IUX8 553 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CFAP206Q8IYR0 622 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 APCDD1Q8J025 514 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 OTUD6BQ8N6M0 293 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 RBMXL3Q8N7X1 1067 aaKnown RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 OLIG1Q8TAK6 271 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 FAM216AQ8WUB2 273 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 TMEM255BQ8WV15 326 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ATL1Q8WXF7 558 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 MIB2Q96AX9 1013 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 PANX2Q96RD6 677 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 POLR3CQ9BUI4 534 aaPredicted RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 NUP58Q9BVL2 599 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ABCB8Q9NUT2 735 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 PANK4Q9NVE7 773 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 ERAP1Q9NZ08 941 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 PTTG2Q9NZH5 202 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 WNT16Q9UBV4 365 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 RALYQ9UKM9 306 aaKnown RBP3.79□□□□□ -1.8
SMCO3-201ENST00000316048 CDH7Q9ULB5 785 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 PCDHGA1Q9Y5H4 931 aa3.79□□□□□ -1.8
SMCO3-201ENST00000316048 A0A1W2PRV1 198 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 E9PMD0 336 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 PES1O00541 588 aaKnown RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF263O14978 683 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 MSH4O15457 936 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 FLOT1O75955 427 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 MOCS3O95396 460 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 IGHV2-70P01814 119 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 RLN1P04808 185 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 CD27P26842 260 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 PTGER4P35408 488 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 ATP6V1E1P36543 226 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 GNL1P36915 607 aaPredicted RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 MTIF2P46199 727 aaKnown RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 THOP1P52888 689 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 BACE1P56817 501 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 MAT1AQ00266 395 aaKnown RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 PRKCZQ05513 592 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 SPP2Q13103 211 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 VEZF1Q14119 521 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 CTU2Q2VPK5 515 aaKnown RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 LACTB2Q53H82 288 aaPredicted RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 HERC4Q5GLZ8 1057 aaPredicted RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 LRRC73Q5JTD7 316 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 EFHC1Q5JVL4 640 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 CENPPQ6IPU0 288 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 ALKBH5Q6P6C2 394 aaKnown RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 FAM171BQ6P995 826 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 TMEM270Q6UE05 265 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 APTXQ7Z2E3 356 aaKnown RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 GPBP1Q86WP2 473 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 CATSPER3Q86XQ3 398 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 UNC45BQ8IWX7 931 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 MYOCDQ8IZQ8 938 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF611Q8N823 705 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 FGFBP3Q8TAT2 258 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 RNF128Q8TEB7 428 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 LINGO1Q96FE5 620 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 C16orf45Q96MC5 204 aaPredicted RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF48Q96MX3 618 aaPredicted RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 BTBD10Q9BSF8 475 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 TUBGCP2Q9BSJ2 902 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF577Q9BSK1 485 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 SF3B5Q9BWJ5 86 aaKnown RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 TUFT1Q9NNX1 390 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 IARS2Q9NSE4 1012 aaKnown RBP3.78□□□□□ -1.8
SMCO3-201ENST00000316048 HIF1ANQ9NWT6 349 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 MALT1Q9UDY8 824 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 MTUS1Q9ULD2 1270 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 ARFGEF1Q9Y6D6 1849 aa3.78□□□□□ -1.8
SMCO3-201ENST00000316048 IGLV3-22A0A075B6J6 115 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 A0A0A6YYC8 382 aaPredicted RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 TRIM49BA6NDI0 452 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 I3L1I5 382 aaPredicted RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 PRAF2O60831 178 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 FCGR3BO75015 233 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 GNA14O95837 355 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 LDLRP01130 860 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 SNRNP70P08621 437 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ACAA1P09110 424 aaPredicted RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 CKMT2P17540 419 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 TIA1P31483 386 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 CASP14P31944 242 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ALDH3A2P51648 485 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 PRELPP51888 382 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 MTCP1P56278 107 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms