RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 UNC50Q53HI1 259 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 TCTE1Q5JU00 501 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 MANEAQ5SRI9 462 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 MLIPQ5VWP3 458 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 BRICD5Q6PL45 260 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 LRIG3Q6UXM1 1119 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 LRRC69Q6ZNQ3 347 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 PRSS41Q7RTY9 318 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDC42-201ENST00000315554 DSELQ8IZU8 1212 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 ESX1Q8N693 406 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 CCNYL1Q8N7R7 359 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 OR52B6Q8NGF0 335 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 PPP4R1Q8TF05 950 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 SLC13A3Q8WWT9 602 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 ATP6V1E2Q96A05 226 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 PTCD3Q96EY7 689 aaKnown RBP7.49□□□□□ -1.21
CDC42-201ENST00000315554 GBP5Q96PP8 586 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 FAM111AQ96PZ2 611 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 SMC6Q96SB8 1091 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 TGIF2Q9GZN2 237 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 IQCGQ9H095 443 aaKnown RBP7.49□□□□□ -1.21
CDC42-201ENST00000315554 ALG2Q9H553 416 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 IPPKQ9H8X2 491 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 ACTR8Q9H981 624 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 GPN2Q9H9Y4 310 aaPredicted RBP7.49□□□□□ -1.21
CDC42-201ENST00000315554 CPNE5Q9HCH3 593 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 ZBTB26Q9HCK0 441 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 GPRC5BQ9NZH0 403 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 PADI1Q9ULC6 663 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 GRID1Q9ULK0 1009 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 ZNF490Q9ULM2 529 aaPredicted RBP7.49□□□□□ -1.21
CDC42-201ENST00000315554 RNF11Q9Y3C5 154 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 TNPO3Q9Y5L0 923 aaKnown RBP7.49□□□□□ -1.21
CDC42-201ENST00000315554 AP1M2Q9Y6Q5 423 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 PCM1Q15154 2024 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 ACACAQ13085 2346 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 HEATR5BQ9P2D3 2071 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 A0A0G2JN53 185 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 A0A1B0GX78 115 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 ZNF860A6NHJ4 632 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 C4orf51C9J302 202 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.48□□□□□ -1.21
CDC42-201ENST00000315554 OR7A17O14581 309 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 DSCR3O14972 297 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 EFSO43281 561 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 SUPT7LO94864 414 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 KLK3P07288 261 aaPredicted RBP7.48□□□□□ -1.21
CDC42-201ENST00000315554 CPA3P15088 417 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 IL1RNP18510 177 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 ATP5F1P24539 256 aaPredicted RBP7.48□□□□□ -1.21
CDC42-201ENST00000315554 RAB8AP61006 207 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 MAT1AQ00266 395 aaKnown RBP7.48□□□□□ -1.21
CDC42-201ENST00000315554 TLE3Q04726 772 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 DNASE1L3Q13609 305 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 SYT16Q17RD7 645 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 TOR1AIP1Q5JTV8 583 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 ZNF678Q5SXM1 525 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 ATP1A1-AS1Q5TC04 95 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 ZNF385CQ66K41 422 aaPredicted RBP7.48□□□□□ -1.21
CDC42-201ENST00000315554 RHBDD2Q6NTF9 364 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 TMIGD1Q6UXZ0 262 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 ZYG11AQ6WRX3 759 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 SHISA6Q6ZSJ9 500 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 VN1R5Q7Z5H4 357 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 EXOC3L1Q86VI1 746 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 LCA5Q86VQ0 697 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 C10orf107Q8IVU9 208 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 PRSS58Q8IYP2 241 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 KRT78Q8N1N4 520 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 TBC1D19Q8N5T2 526 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 ENDOVQ8N8Q3 282 aaKnown RBP7.48□□□□□ -1.21
CDC42-201ENST00000315554 CAMKVQ8NCB2 501 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 OR9A4Q8NGU2 314 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 TCP10LQ8TDR4 215 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 TRPC4APQ8TEL6 797 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 ZNF483Q8TF39 744 aaPredicted RBP7.48□□□□□ -1.21
CDC42-201ENST00000315554 COL26A1Q96A83 441 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 MTFMTQ96DP5 389 aaKnown RBP7.48□□□□□ -1.21
CDC42-201ENST00000315554 TM4SF19Q96DZ7 209 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 MECRQ9BV79 373 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 YIPF2Q9BWQ6 316 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 CAPS2Q9BXY5 557 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 SHCBP1LQ9BZQ2 653 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 AICDAQ9GZX7 198 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 KLHL31Q9H511 634 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 PRDM9Q9NQV7 894 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 SLC22A11Q9NSA0 550 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 ARGLU1Q9NWB6 273 aaPredicted RBP7.48□□□□□ -1.21
CDC42-201ENST00000315554 ZFP69BQ9UJL9 534 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 TMCO1Q9UM00 188 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 SRPK3Q9UPE1 567 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 PLLPQ9Y342 182 aa7.48□□□□□ -1.21
CDC42-201ENST00000315554 URB1O60287 2271 aaKnown RBP7.48□□□□□ -1.21
CDC42-201ENST00000315554 FREM2Q5SZK8 3169 aa7.47□□□□□ -1.21
CDC42-201ENST00000315554 ASPMQ8IZT6 3477 aa7.47□□□□□ -1.21
CDC42-201ENST00000315554 KCNE1BA0A087WTH5 132 aa7.47□□□□□ -1.21
CDC42-201ENST00000315554 UQCRHLA0A096LP55 91 aa7.47□□□□□ -1.21
CDC42-201ENST00000315554 FITM1A5D6W6 292 aa7.47□□□□□ -1.21
CDC42-201ENST00000315554 SGK494L7N484 410 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms