RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ADAMTS4O75173 837 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 SNX4O95219 450 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 SPAM1P38567 509 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 NSG1P42857 185 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 KRR1Q13601 381 aaKnown RBP12.95□□□□□ -0.34
SKA3-202ENST00000314759 PRSS55Q6UWB4 352 aaPredicted RBP12.95□□□□□ -0.34
SKA3-202ENST00000314759 ZNF605Q86T29 641 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 OR10G2Q8NGC3 310 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 SPPL2AQ8TCT8 520 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 WFDC5Q8TCV5 224 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 SOCS4Q8WXH5 440 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 BHMTQ93088 406 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 NMRK2Q9NPI5 230 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 MAU2Q9Y6X3 613 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 ADRA2AP08913 450 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 PCSK2P16519 638 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 CTGFP29279 349 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 ETV6P41212 452 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 CSKP41240 450 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 SLC15A1P46059 708 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 BCL2L1Q07817 233 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 CHIT1Q13231 466 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 SPANXN2Q5MJ10 180 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 C17orf99Q6UX52 265 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 CCDC190Q86UF4 302 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 VRK3Q8IV63 474 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 OR8H2Q8N162 312 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 ASB11Q8WXH4 323 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 P2RY13Q9BPV8 354 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 C1orf226A1L170 272 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 AGAP14A8MT82 685 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 KIAA0513O60268 411 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 PRMT3O60678 531 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 CD22P20273 847 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 GAB1Q13480 694 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 GPR50Q13585 617 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 RGNQ15493 299 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 RGMBQ6NW40 437 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 ZNF783Q6ZMS7 281 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 TPGS1Q6ZTW0 290 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 NAGSQ8N159 534 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 UTP15Q8TED0 518 aaKnown RBP12.95□□□□□ -0.34
SKA3-202ENST00000314759 ALG14Q96F25 216 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 ZFYVE19Q96K21 471 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 OR2A14Q96R47 310 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 MTERF1Q99551 399 aaKnown RBP12.95□□□□□ -0.34
SKA3-202ENST00000314759 CCM2Q9BSQ5 444 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 ATG10Q9H0Y0 220 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 TAS2R9Q9NYW1 312 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 DKK3Q9UBP4 350 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 KLK4Q9Y5K2 254 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 SERTM1A2A2V5 107 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 C2orf78A6NCI8 922 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 LOC110117498-PIK3R3F6TDL0 507 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 PCDH7O60245 1069 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 OPN1SWP03999 348 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 HIST1H2AGP0C0S8 130 aaPredicted RBP12.94□□□□□ -0.34
SKA3-202ENST00000314759 POLR2EP19388 210 aaKnown RBP12.94□□□□□ -0.34
SKA3-202ENST00000314759 HIST1H2ADP20671 130 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 PIK3CBP42338 1070 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 OR1E2P47887 323 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 GATMP50440 423 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 SELENOWP63302 87 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 SMARCB1Q12824 385 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 TBRG1Q3YBR2 411 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 ZMAT1Q5H9K5 638 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 FUT10Q6P4F1 479 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 DENND6BQ8NEG7 585 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 HIST1H2AHQ96KK5 128 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 OR5M11Q96RB7 305 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 HIST1H2AJQ99878 128 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 H2AFJQ9BTM1 129 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 DUSP26Q9BV47 211 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 BBS2Q9BXC9 721 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 TRIM39Q9HCM9 518 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 DNAJC11Q9NVH1 559 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 MS4A12Q9NXJ0 267 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 NPAP1Q9NZP6 1156 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 VPS29Q9UBQ0 182 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 CFAP20Q9Y6A4 193 aaKnown RBP12.94□□□□□ -0.34
SKA3-202ENST00000314759 SCN8AQ9UQD0 1980 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 PNMA8CA0A1B0GUJ8 204 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 NPIPB15A6NHN6 443 aaPredicted RBP12.94□□□□□ -0.34
SKA3-202ENST00000314759 GABRR3A8MPY1 467 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 ADAMDEC1O15204 470 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 CKBP12277 381 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 HLA-EP13747 358 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 JUPP14923 745 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 RFX2P48378 723 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 HNMTP50135 292 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 DOC2BQ14184 412 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 TMEM173Q86WV6 379 aaPredicted RBP12.94□□□□□ -0.34
SKA3-202ENST00000314759 APCDD1Q8J025 514 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 B3GNT7Q8NFL0 401 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 OR4C15Q8NGM1 316 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 BEX2Q9BXY8 128 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 ZDHHC3Q9NYG2 299 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 MUTYHQ9UIF7 546 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 GABRQQ9UN88 632 aa12.94□□□□□ -0.34
SKA3-202ENST00000314759 FRMPD3Q5JV73 1810 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms