RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ITPRIPL2Q3MIP1 535 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 TMTC4Q5T4D3 741 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 ANKRD54Q6NXT1 300 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 KCTD8Q6ZWB6 473 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 COMMD6Q7Z4G1 85 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 CENPSQ8N2Z9 138 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 JPH3Q8WXH2 748 aaPredicted RBP11.94□□□□□ -0.5
RNF4-201ENST00000314289 NELL1Q92832 810 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 CIDECQ96AQ7 238 aaPredicted RBP11.94□□□□□ -0.5
RNF4-201ENST00000314289 DUSP26Q9BV47 211 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 HDAC8Q9BY41 377 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 EPHX3Q9H6B9 360 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 TRNAU1APQ9NX07 287 aaKnown RBP11.94□□□□□ -0.5
RNF4-201ENST00000314289 FBXL12Q9NXK8 326 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 PLXND1Q9Y4D7 1925 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 A0A0G2JN53 185 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 FUOMA2VDF0 154 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 TMEM221A6NGB7 291 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 UPK1AO00322 258 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 UGDHO60701 494 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 NOL3O60936 208 aaKnown RBP11.94□□□□□ -0.5
RNF4-201ENST00000314289 MYO1DO94832 1006 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 RASAL1O95294 804 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 KLK1P06870 262 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 MYF6P23409 242 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 VAC14Q08AM6 782 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 DUOXA1Q1HG43 343 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 SPATS1Q496A3 300 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 ZNF385BQ569K4 471 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 LRIF1Q5T3J3 769 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 INTS11Q5TA45 600 aaKnown RBP11.94□□□□□ -0.5
RNF4-201ENST00000314289 FAM46CQ5VWP2 391 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 DCDC5Q6ZRR9 648 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 NCCRP1Q6ZVX7 275 aaPredicted RBP11.94□□□□□ -0.5
RNF4-201ENST00000314289 SLC5A11Q8WWX8 675 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 BDH2Q9BUT1 245 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 TRPV4Q9HBA0 871 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 EXO1Q9UQ84 846 aaKnown RBP11.94□□□□□ -0.5
RNF4-201ENST00000314289 CA5BQ9Y2D0 317 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 HEATR5BQ9P2D3 2071 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 MYO10Q9HD67 2058 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 K7EQS6 105 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 C1GALT1C1LP0DN25 315 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 RXRGP48443 463 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 GZMMP51124 257 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 ZNF829Q3KNS6 432 aaPredicted RBP11.93□□□□□ -0.5
RNF4-201ENST00000314289 CPTPQ5TA50 214 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 SPESP1Q6UW49 350 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 ZNF852Q6ZMS4 543 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 ZNF765Q7L2R6 523 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 VTCN1Q7Z7D3 282 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 TMEM179BQ7Z7N9 219 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 LRRTM4Q86VH4 590 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 LRRC56Q8IYG6 542 aaPredicted RBP11.93□□□□□ -0.5
RNF4-201ENST00000314289 PAPD5Q8NDF8 572 aaKnown RBP11.93□□□□□ -0.5
RNF4-201ENST00000314289 OR5AK3PQ8NH89 298 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 SH3GL1Q99961 368 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 IMP3Q9NV31 184 aaKnown RBP11.93□□□□□ -0.5
RNF4-201ENST00000314289 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 ACSL6Q9UKU0 697 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 OR52A4PA6NMU1 304 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 FCGR1AP12314 374 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 GAB1Q13480 694 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 PRAMEF14Q5SWL7 426 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 PRAMEF13Q5VWM6 474 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 PRR23BQ6ZRT6 265 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 SPRED1Q7Z699 444 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 ZC3H7AQ8IWR0 971 aaKnown RBP11.93□□□□□ -0.5
RNF4-201ENST00000314289 C11orf24Q96F05 449 aaPredicted RBP11.93□□□□□ -0.5
RNF4-201ENST00000314289 COX14Q96I36 57 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 MACROD1Q9BQ69 325 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 WDR26Q9H7D7 661 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 GORASP2Q9H8Y8 452 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 AASDHPPTQ9NRN7 309 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 SMPD3Q9NY59 655 aaPredicted RBP11.93□□□□□ -0.5
RNF4-201ENST00000314289 TUBA8Q9NY65 449 aaPredicted RBP11.93□□□□□ -0.5
RNF4-201ENST00000314289 CLEC1BQ9P126 229 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 RAPGEFL1Q9UHV5 662 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 GPR34Q9UPC5 381 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 MAN2B2Q9Y2E5 1009 aa11.93□□□□□ -0.5
RNF4-201ENST00000314289 EVPLLA8MZ36 301 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 H7BY64 318 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 hCG_2039718K7EN88 272 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 SCAMP2O15127 329 aaKnown RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 B4GAT1O43505 415 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 VEGFDO43915 354 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 HOXB9P17482 250 aaPredicted RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 NR1D2Q14995 579 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 NXPE4Q6UWF7 544 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 CHTF18Q8WVB6 975 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 PRAP1Q96NZ9 151 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 SGPP1Q9BX95 441 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 RSPH9Q9H1X1 276 aaPredicted RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 C5AR2Q9P296 337 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 SPASTQ9UBP0 616 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 SNRNP200O75643 2136 aaKnown RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D3DA0A087WVF3 549 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D3IA0A087WXS9 549 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D3EA0A087X179 549 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D3KA0A087X1G2 549 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms