RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 C16orf78Q8WTQ4 265 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 NELL1Q92832 810 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 SLC6A18Q96N87 628 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 ZNF583Q96ND8 569 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 QRFPRQ96P65 431 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 INPP5KQ9BT40 448 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 SARGQ9BW04 601 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 TCEAL2Q9H3H9 227 aaPredicted RBP16.02■□□□□ 0.16
CLCF1-201ENST00000312438 REEP4Q9H6H4 257 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 MYNNQ9NPC7 610 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 WBP11Q9Y2W2 641 aaKnown RBP16.02■□□□□ 0.16
CLCF1-201ENST00000312438 KIR2DS5A0A0G2JLQ3 304 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 A0A0G2JNG1 304 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 KIR2DS3K7RE56 304 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 ARPC2O15144 300 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 VIPP01282 170 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 GBAP04062 536 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 PIM1P11309 404 aaPredicted RBP16.01■□□□□ 0.15
CLCF1-201ENST00000312438 KIR2DS5Q14953 304 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 ZNF542PQ5EBM4 170 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 IRAK1BP1Q5VVH5 260 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 DNAJC14Q6Y2X3 702 aaPredicted RBP16.01■□□□□ 0.15
CLCF1-201ENST00000312438 TAF8Q7Z7C8 310 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 TMEM126BQ8IUX1 230 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 TRIM48Q8IWZ4 208 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 ADGRF3Q8IZF5 1079 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 TNIP2Q8NFZ5 429 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 PJA1Q8NG27 643 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 JPH3Q8WXH2 748 aaPredicted RBP16.01■□□□□ 0.15
CLCF1-201ENST00000312438 PANX1Q96RD7 426 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 F2RL3Q96RI0 385 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 DPH7Q9BTV6 452 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 EFHD1Q9BUP0 239 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 VCX3BQ9H321 246 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 SLC6A20Q9NP91 592 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 POT1Q9NUX5 634 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 BTNL2Q9UIR0 455 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 BTBD3Q9Y2F9 522 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 BTN3A3O00478 584 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 PLPP1O14494 284 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 CASQ2O14958 399 aaPredicted RBP16.01■□□□□ 0.15
CLCF1-201ENST00000312438 KLHL18O94889 574 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 ATP6V1B2P21281 511 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 CD38P28907 300 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 PTPN6P29350 595 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 C2orf80Q0P641 193 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 KIR2DS3Q14952 304 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 MUM1Q2TAK8 710 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 GTDC1Q4AE62 458 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 CCNYL2Q5T2Q4 361 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 GLYATQ6IB77 296 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 FAM71E1Q6IPT2 247 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 IKBIPQ70UQ0 350 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 DEFB119Q8N690 84 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 OR10A6Q8NH74 314 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 CREB3L4Q8TEY5 395 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 RGMAQ96B86 450 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 MIEF2Q96C03 454 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 MTERF3Q96E29 417 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 PIF1Q9H611 641 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 SLC6A13Q9NSD5 602 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 ATAD3AQ9NVI7 634 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 SH3BP4Q9P0V3 963 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 MAGEL2Q9UJ55 1249 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 EXO1Q9UQ84 846 aaKnown RBP16.01■□□□□ 0.15
CLCF1-201ENST00000312438 INVSQ9Y283 1065 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 PCDHGA2Q9Y5H1 932 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 SLCO1B1Q9Y6L6 691 aa16.01■□□□□ 0.15
CLCF1-201ENST00000312438 GSNP06396 782 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 HOXB9P17482 250 aaPredicted RBP16■□□□□ 0.15
CLCF1-201ENST00000312438 TPP2P29144 1249 aaPredicted RBP16■□□□□ 0.15
CLCF1-201ENST00000312438 AHRP35869 848 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 CDKN2CP42773 168 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 CXCL12P48061 93 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 OR4D2P58180 307 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 TAS2R50P59544 299 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 PLCL1Q15111 1095 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 PRRT3Q5FWE3 981 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 ZNF425Q6IV72 752 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 ANKRD26P1Q6NSI1 321 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 IQCHQ86VS3 1027 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 PLD3Q8IV08 490 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 FAM20CQ8IXL6 584 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 FBXL6Q8N531 539 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 OR2T12Q8NG77 320 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 DNAJC9Q8WXX5 260 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 CCDC115Q96NT0 180 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 BHLHE41Q9C0J9 482 aaPredicted RBP16■□□□□ 0.15
CLCF1-201ENST00000312438 TWSG1Q9GZX9 223 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 KAT8Q9H7Z6 458 aaKnown RBP16■□□□□ 0.15
CLCF1-201ENST00000312438 COPS7BQ9H9Q2 264 aaPredicted RBP16■□□□□ 0.15
CLCF1-201ENST00000312438 CCM2LQ9NUG4 571 aaPredicted RBP16■□□□□ 0.15
CLCF1-201ENST00000312438 CPNE7Q9UBL6 633 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 ADAM29Q9UKF5 820 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 SIT1Q9Y3P8 196 aa16■□□□□ 0.15
CLCF1-201ENST00000312438 ARHGAP10A1A4S6 786 aa15.99■□□□□ 0.15
CLCF1-201ENST00000312438 RNASET2O00584 256 aaKnown RBP15.99■□□□□ 0.15
CLCF1-201ENST00000312438 CAPN5O15484 640 aaPredicted RBP15.99■□□□□ 0.15
CLCF1-201ENST00000312438 GMNNO75496 209 aa15.99■□□□□ 0.15
CLCF1-201ENST00000312438 B3GALT4O96024 378 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms