RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 COMMD9Q9P000 198 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 PCDHGA4Q9Y5G9 962 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 B3GALT2O43825 422 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 MT-ND2P03891 347 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 CSTF1Q05048 431 aaKnown RBP16.65■□□□□ 0.26
GABRB3-202ENST00000311550 NDUFA5Q16718 116 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 GRASPQ7Z6J2 395 aaPredicted RBP16.65■□□□□ 0.26
GABRB3-202ENST00000311550 PPP1R14AQ96A00 147 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 PPP1R14BQ96C90 147 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 ZNF354BQ96LW1 612 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 HCN4Q9Y3Q4 1203 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 IRAK3Q9Y616 596 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 GJB3O75712 270 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 RPP38P78345 283 aaKnown RBP16.65■□□□□ 0.26
GABRB3-202ENST00000311550 GRIK2Q13002 908 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 FBXO43Q4G163 708 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 NCEH1Q6PIU2 408 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 PAQR9Q6ZVX9 377 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 TCEANCQ8N8B7 351 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 NOS1APO75052 506 aaPredicted RBP16.65■□□□□ 0.26
GABRB3-202ENST00000311550 SLC15A1P46059 708 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 GK3PQ14409 553 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 CTC1Q2NKJ3 1217 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 CCDC80Q76M96 950 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 TRIM73Q86UV7 250 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.65■□□□□ 0.26
GABRB3-202ENST00000311550 SMPDL3AQ92484 453 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 SEZ6LQ9BYH1 1024 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 REEP4Q9H6H4 257 aa16.65■□□□□ 0.26
GABRB3-202ENST00000311550 FARSBQ9NSD9 589 aaKnown RBP16.65■□□□□ 0.26
GABRB3-202ENST00000311550 FAM172BPA6NC97 362 aa16.64■□□□□ 0.26
GABRB3-202ENST00000311550 ALPPL2P10696 532 aa16.64■□□□□ 0.26
GABRB3-202ENST00000311550 BPIP17213 487 aa16.64■□□□□ 0.26
GABRB3-202ENST00000311550 S100A1P23297 94 aa16.64■□□□□ 0.26
GABRB3-202ENST00000311550 UAP1L1Q3KQV9 507 aa16.64■□□□□ 0.26
GABRB3-202ENST00000311550 OR52E8Q6IFG1 317 aa16.64■□□□□ 0.26
GABRB3-202ENST00000311550 VTCN1Q7Z7D3 282 aa16.64■□□□□ 0.26
GABRB3-202ENST00000311550 TRNT1Q96Q11 434 aaKnown RBP16.64■□□□□ 0.26
GABRB3-202ENST00000311550 HERC2P3Q9BVR0 1158 aa16.64■□□□□ 0.26
GABRB3-202ENST00000311550 TREX1Q9NSU2 369 aa16.64■□□□□ 0.26
GABRB3-202ENST00000311550 CDRT1O95170 752 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 GNRH1P01148 92 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 GGT1P19440 569 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 DDX6P26196 483 aaKnown RBP eCLIP16.64■□□□□ 0.25
GABRB3-202ENST00000311550 SLC13A2Q13183 592 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 LASP1Q14847 261 aaKnown RBP16.64■□□□□ 0.25
GABRB3-202ENST00000311550 MARCH9Q86YJ5 346 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 PIANPQ8IYJ0 282 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 GRHL3Q8TE85 626 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 FAM129BQ96TA1 746 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 A0A0J9YVX5 310 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 FAM170BA6NMN3 283 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 FGF18O76093 207 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 MYF6P23409 242 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 PGDP52209 483 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 ST3GAL4Q11206 333 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 UGT2A3Q6UWM9 527 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 MINDY2Q8NBR6 621 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 MZB1Q8WU39 189 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 TMED9Q9BVK6 235 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 PRAMEF33A0A0G2JMD5 474 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 PRAMEF10O60809 474 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 MITFO75030 526 aaPredicted RBP16.64■□□□□ 0.25
GABRB3-202ENST00000311550 ATAT1Q5SQI0 421 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 HMGN2P46Q86SG4 172 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 PIGKQ92643 395 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 RIPOR3Q96MK2 946 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 GINS4Q9BRT9 223 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 WDR83Q9BRX9 315 aaKnown RBP16.64■□□□□ 0.25
GABRB3-202ENST00000311550 FAM25EA8MYX2 175 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 SOCS7O14512 581 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 GPX3P22352 226 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 CLECL1Q8IZS7 167 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 DIABLOQ9NR28 239 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 TMEM181Q9P2C4 612 aa16.64■□□□□ 0.25
GABRB3-202ENST00000311550 H7BY64 318 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 GPR39O43194 453 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 C7P10643 843 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 HSD17B2P37059 387 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 TUBA1BP68363 451 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 BTN3A2P78410 334 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 DOC2AQ14183 400 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 ZNF783Q6ZMS7 281 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 ASB18Q6ZVZ8 466 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 TUBA1AQ71U36 451 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 DTWD1Q8N5C7 304 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 OR8H1Q8NGG4 311 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 OR6K6Q8NGW6 343 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 CD200R1Q8TD46 325 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 SORCS1Q8WY21 1168 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 CAMK1GQ96NX5 476 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 PRAP1Q96NZ9 151 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 PPIEQ9UNP9 301 aaKnown RBP16.63■□□□□ 0.25
GABRB3-202ENST00000311550 MNDAP41218 407 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 LIPJQ5W064 366 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 ENPP7Q6UWV6 458 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 LRP5O75197 1615 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 LSM1O15116 133 aaKnown RBP16.63■□□□□ 0.25
GABRB3-202ENST00000311550 HPRP00739 348 aa16.63■□□□□ 0.25
GABRB3-202ENST00000311550 CLK3P49761 638 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms