RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 IFI35P80217 286 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 NRG1Q02297 640 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 HSF2Q03933 536 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SLC10A7Q0GE19 358 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 RSPO2Q6UXX9 243 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 B3GNT6Q6ZMB0 384 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MFSD6LQ8IWD5 586 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CBARPQ8N350 705 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ACVR1CQ8NER5 493 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF483Q8TF39 744 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 TSEN15Q8WW01 171 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PGAP3Q96FM1 320 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PCED1AQ9H1Q7 454 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PAK6Q9NQU5 681 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SMPD3Q9NY59 655 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 FTSJ1Q9UET6 329 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 DKKL1Q9UK85 242 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 POFUT2Q9Y2G5 429 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ADAM18Q9Y3Q7 739 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 TIAM2Q8IVF5 1701 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 A0A1W2PPW3 197 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PAPSS1O43252 624 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 GADD45GO95257 159 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 FBLP22087 321 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MAP3K8P41279 467 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PGDP52209 483 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ABRAXAS2Q15018 415 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MLC1Q15049 377 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PDK3Q15120 406 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 GXYLT1Q4G148 440 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 DDI2Q5TDH0 399 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 LYSMD4Q5XG99 296 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ISLR2Q6UXK2 745 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 DEF8Q6ZN54 512 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 TAC4Q86UU9 113 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 FUKQ8N0W3 1084 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 C4orf32Q8N8J7 132 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 NLGN2Q8NFZ4 835 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 LMX1AQ8TE12 382 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF689Q96CS4 500 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SCRN2Q96FV2 425 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 OR52B2Q96RD2 323 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 B3GNT5Q9BYG0 378 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ERVK-5Q9HDB9 667 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PIGVQ9NUD9 493 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PRELID3BQ9Y3B1 194 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CXorf51AA0A1B0GTR3 108 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SH3D21A4FU49 640 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 OR6C74A6NCV1 312 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 E7EQ34 232 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MFSD11O43934 449 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CSF2RAP15509 400 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CCND3P30281 292 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 NCBP2P52298 156 aaKnown RBP eCLIP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PLA2G16P53816 162 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 NME5P56597 212 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF169Q14929 603 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 UGCGQ16739 394 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 POM121L1PQ3SYA9 428 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CRB2Q5IJ48 1285 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 DCAF12Q5T6F0 453 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 KCNK18Q7Z418 384 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MRPL43Q8N983 215 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 INO80EQ8NBZ0 244 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 OR52E4Q8NGH9 312 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 TNFAIP8L1Q8WVP5 186 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ING5Q8WYH8 240 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 C22orf15Q8WYQ4 148 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 EDAQ92838 391 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 RFT1Q96AA3 541 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ORAI3Q9BRQ5 295 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CEP41Q9BYV8 373 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CD244Q9BZW8 370 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ZCWPW1Q9H0M4 648 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CXorf56Q9H5V9 222 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 IFT46Q9NQC8 304 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CACFD1Q9UGQ2 172 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 POLEQ07864 2286 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 TAF1P21675 1872 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 TMEM265A0A087WTH1 108 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 ATP6AP2A0A1C7CYW4 349 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 FAM172BPA6NC97 362 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 TRIM64A6NGJ6 449 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 PRAMEF11O60813 436 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 TRAPPC6AO75865 159 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 ANGPTL1O95841 491 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 MT-ND2P03891 347 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 ITGB2P05107 769 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 SFTPCP11686 197 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF28P17035 718 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 IGFBP5P24593 272 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 ITGB7P26010 798 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 SLC6A4P31645 630 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 TSFMP43897 325 aaKnown RBP3.09□□□□□ -1.92
CLOCK-201ENST00000309964 CASP9P55211 416 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 BST1Q10588 318 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 CLCA4Q14CN2 919 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 ANKRD26P1Q6NSI1 321 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 SLC39A4Q6P5W5 647 aa3.09□□□□□ -1.92
CLOCK-201ENST00000309964 SCML4Q8N228 414 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms