RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 GRHL2Q6ISB3 625 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 TMEM214Q6NUQ4 689 aaKnown RBP8.65□□□□□ -1.02
PDE4D-201ENST00000309641 ZNF517Q6ZMY9 492 aaPredicted RBP8.65□□□□□ -1.02
PDE4D-201ENST00000309641 CROCCP2Q86T23 111 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 SYVN1Q86TM6 617 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 PDSS2Q86YH6 399 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 SLC22A9Q8IVM8 553 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 SPACA3Q8IXA5 215 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 ANKRD42Q8N9B4 389 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 KDF1Q8NAX2 398 aaPredicted RBP8.65□□□□□ -1.02
PDE4D-201ENST00000309641 ZNF248Q8NDW4 579 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 RDH11Q8TC12 318 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 PPP4R1Q8TF05 950 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 CT55Q8WUE5 264 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 KCNE4Q8WWG9 221 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 ATP6V1E2Q96A05 226 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 MTFMTQ96DP5 389 aaKnown RBP8.65□□□□□ -1.02
PDE4D-201ENST00000309641 KCNA7Q96RP8 456 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 HBEGFQ99075 208 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 MTERF1Q99551 399 aaKnown RBP8.65□□□□□ -1.02
PDE4D-201ENST00000309641 SH3GL2Q99962 352 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 EFCAB11Q9BUY7 163 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 NTMT1Q9BV86 223 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 SLC7A5P2Q9GIP4 190 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 VIPAS39Q9H9C1 493 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 FARSBQ9NSD9 589 aaKnown RBP8.65□□□□□ -1.02
PDE4D-201ENST00000309641 PADI1Q9ULC6 663 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 ACTL7BQ9Y614 415 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 MRPS18BQ9Y676 258 aaKnown RBP8.65□□□□□ -1.02
PDE4D-201ENST00000309641 BOD1L1Q8NFC6 3051 aa8.65□□□□□ -1.02
PDE4D-201ENST00000309641 A0A0A6YYC8 382 aaPredicted RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 TMEM120BA0PK00 339 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 ZNF860A6NHJ4 632 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 GOLGA6L10A6NI86 522 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 I3L1I5 382 aaPredicted RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 PRPF4O43172 522 aaKnown RBP eCLIP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 CLDN9O95484 217 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 DHRS4L1P0CG22 281 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 PCNAP12004 261 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 AHRP35869 848 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 FOXA1P55317 472 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 WDR4P57081 412 aaKnown RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 DNAJB13P59910 316 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 RAB8AP61006 207 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 RPS18P62269 152 aaKnown RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 MAT1AQ00266 395 aaKnown RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 DDX39BQ13838 428 aaKnown RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 SYT16Q17RD7 645 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 LIPMQ5VYY2 423 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 LIPJQ5W064 366 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 METTL2BQ6P1Q9 378 aaKnown RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 CYB5D1Q6P9G0 228 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 FAM198BQ6UWH4 519 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 COX15Q7KZN9 410 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 LAS2Q8IYD9 372 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 KRT78Q8N1N4 520 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 IL22RA1Q8N6P7 574 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 L3MBTL4Q8NA19 623 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 CAMKVQ8NCB2 501 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 OR9A4Q8NGU2 314 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 CCT6BQ92526 530 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 MR1Q95460 341 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 THAP11Q96EK4 314 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 CRELD1Q96HD1 420 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 TXLNGQ9NUQ3 528 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 CROTQ9UKG9 612 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 ZMIZ1Q9ULJ6 1067 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 SRPK3Q9UPE1 567 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 A0A1B0GX78 115 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 LRIT2A6NDA9 550 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 SAP18O00422 153 aaKnown RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 TERTO14746 1132 aaKnown RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 DSCR3O14972 297 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 TRIM13O60858 407 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 ETHE1O95571 254 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 TGFB1P01137 390 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 CHRNGP07510 517 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 BPGMP07738 259 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 SLC35G6P0C7Q6 338 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 ZNF888P0CJ79 500 aaPredicted RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 LIFP15018 202 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 TCN2P20062 427 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 CD82P27701 267 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 SERPINB4P48594 390 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 ABHD18Q0P651 414 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 MUM1Q2TAK8 710 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 FAM214AQ32MH5 1076 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 NKAIN1Q4KMZ8 207 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 DEFB134Q4QY38 66 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 AGBL2Q5U5Z8 902 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 MED27Q6P2C8 311 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 FRMD7Q6ZUT3 714 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 MILR1Q7Z6M3 343 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 ESX1Q8N693 406 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 CDYL2Q8N8U2 506 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 TTC29Q8NA56 475 aaPredicted RBP8.64□□□□□ -1.03
PDE4D-201ENST00000309641 HUS1BQ8NHY5 278 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 WDR20Q8TBZ3 569 aa8.64□□□□□ -1.03
PDE4D-201ENST00000309641 MGARPQ8TDB4 240 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms